kif6 (kif6)


Basic Information

Item Value
gene id kif6
gene name kif6
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 34493825 ~ 34633946 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022672506.1
CCACAAACAGAGGACCTGATTACCCCAGCACTGAGGGGATATGGAGGAGCTGCTAAAGGCTGTAAATAAACGGGTTTCTGACTGAAATATTGCTGCTAATCTGACGGAAGATGGTAAAGCAGACTATCCAGATCTTCGCCCGGGTTAAACCGGCAGGAAAAGCCCCGGCGGTGTACTCTGCGGATAATGAGGAGCAGGGTGGAGGCAGACTGGAGTTCGTCGTTCCGAGAGATCTCGCAGATGGCTTCGTTAACAACAAGAGGGAGAGCTACAGATTCAGATTCCAGAAGGTTTTTGATCAAACAGCCAAGCAAGACGACATTTTTAAGATGATTGCCAAGCCTGTAGCTGATAATGTGCTGGCAGGATACAATGGCACAATCTTTGCCTATGGGCAGACCGGCAGCGGCAAGACCTTCACCATCACCGGTGGTGCTGAGAGCTACAGTGACCGAGGAATCATCCCCAGAACCCTGTCTTACCTCTACCAGCATTTCAGCCAGGACAGCAGCAAGGTGTACACCACTCACATATCTTACCTGGAGATCTACAATGAGGTGGGATACGACCTTCTGGATCCCCGACATGAAGCATCCAACCTGGAGGACTTACCGAAAGTGACAATTATGGAAGATCCTGACCAAAACATTCACCTCAAGAATCTGTCATTGCAAGCATCAGCCAATGAAGAAGAGGCTTTAAATTTGCTGTTCCTGGGTGACACCAATCGCATGATTGCAGAGACCCCCATGAATCAGGCCTCCACACGCTCCCACTGCATCTTCACCGTTCACCTGTGCGTCCGTGAGCCGGGCTCGGCGACTGTGTGCCGCTCCAAACTCCACCTGGTAGATCTGGCTGGTTCTGAGAGAGTGGGAAAGACGGGTGTGGGGGGGCAGATCCTAACTGAGGCCAAGTATATCAACCTGTCCCTGCACTACCTAGAGCAGGTCATCACAGCTCTCTCGGAGAAGAACCGTTCTCACATCCCGTACCGCAACTCCATGATGACCTCTGTTCTCAGAGACAGTCTGGGGGGAAACTGCATGACCACCATGATTGCCACTGTGTCAGTGGATAAGAGGAACATCGATGAGTCTATTTCCACATGCCGCTTTGCTCAGAGAGTGGCCCTGATTAAAAACGAAGCTCTACTGAATGAGGAGCTGGATCCAGCACTTGTGACTGCTCTCCTCCAGATCTCTCCGGCTGTCCGTGCCTCGCGTCCAGCCGCCTGTGCCAGCGGCGAGCACGCATTCGAGTTGGAGGAGCAGGTAAAGGTGTTTTTGGATGATCCTGACCTTGACGGAGCTCTAGACCTCGGGCCAGACATgagaaaaatacactactgcttttCGCTTCTAAAGGCGAGGGTGCGGGAGAAGCCGAGTCTTCAGATCGGGACAGATACCAGCAGTCCTCTGTCATTATCGGACAGGCATGACCGCCAAACCAGCGCTGAAGAGCTGCTGAAACTGAAGGACATGCTAACTCAGCGCGACAACGAGATCAGTATACTCGTGAGCATGctgaagaaggagaagaagaaggttCAGGAAGCCAGCGCTCAGATAGCGAACTTCTCCAGCAGAGATACGgactcctcctccagcagcactcCTGCTGAGAAGAGACTGACAGGTGAAGCTTCAGAGAGCTTCACACAAACTCAGCATCTAAAGACCAGACCAAGAGGGCCAGAGCTGTCTATGGGCCGACAAGAAGCATTTGAGATCTTTAGGAGAGATCATGAGGATCGCCTGAGTATTGACGACAATAAGGCCATACTGAAGCAGAGGTTTGCAGAAGCTAAAGCACTGGGGGAACAGGTTAACCAGGCCAGGAACAGAGTCAATGAGCTGAAGAAACAGTTGGAGGTGAGACGGATGCAGATAGCAGCGGAGGGTGTAGTAAAAGATCAGCCAAATTCAGAATCAGACCCTCTAGAGGAGAGATTGCGCAGCCAGAttgaagaggagaagaaaagTTATAAGAGCACCTTTGGACGTTTAAAAGGCTTGAAGACTGAGATTGAGCATCTACAGCACCTGCTTCAGAAGTCAAAGATCAGGCTGCAGAGGGACTTTCAGGACTGGTGGACGCAGGAAGCCTCAAGGCTACAGCAGGACCAAAAACCAGAAAGTGCAGAAGTGAGGCAGAGTCAGGAGAGCTCTCTCTTCACCTCTTCATCCAGtTCATATGATCGAGCCATCAACACACAAGAGAGGAAACCCAGTGATGTAACTGCTCCATCTCCAAGAGAACTGAGAGCCTTGTCTTCTTCTGGCCTGAACTCTACATCTATCCCAATGACTGGAGACCAGCAGACTGACGCAGATATACTGGCCTTTATTAAAGCCAGACAAAGCCTGCTCACCAGATCAGgtctggCACCAAaatgaagagttcagaaaacaggataaacacagtgtagacaaaCCTGAGGTTTGATTACACACTTCAAATGAATTTTCGTAATGACATGATGCTTACTGCATTGGAACTGTTTGGACTTTGGCACAGCCATAATGCAGGGGCTCTGATTGGTCCTGCATACTAAAGGTGGTGCCACTTTGATCTGAGGGTTGCTGGGTCAAATCCTGGATTATGCTACTTGCCATCATCAGCGGCCAGACTCTGAGCGAGCACAACTGGCCAtgctgtctctgggtgggtagatggcgctctctcgcGGCTGCACTTTCTTCTGAGCGTGCTGGCTGcctggtaatgctgcatcagcagtggttcgaaaaagaggcggagtctgactttacatgtgtcgagAGGAGGCTTGTGCTTGTCTTCACTCTCCTTGTgtttgaggcatcactagtgatagggggagtaatTGACCTAGCAAAATTGGGGataaaaatgggataaaaatattaataaaacgaGCATAATGGA

Function

symbol description
kif6 Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Acts upstream of or within spinal cord development. Located in ciliary base. Is expressed in brain; intestine; ovary; and testis. Used to study idiopathic scoliosis. Orthologous to human KIF6 (kinesin family member 6).

NR:

description
kinesin-like protein KIF6

GO: NA

KEGG:

id description
K10397 KIF6_9; kinesin family member 6/9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022672506.1 True 2913 mRNA 0.50 22 34493825 34633946

Neighbor

gene id symbol gene type direction distance location
LOC111193251 NA coding upstream 192691 34298723 ~ 34301134 (+)
mocs1 mocs1,LOC107656745 coding upstream 229140 34243119 ~ 34264685 (+)
fosl2 fosl2,LOC107656746,LOC107726077,LOC107553732 coding upstream 267045 34212417 ~ 34226780 (+)
babam2 bre,LOC107553730,LOC107656747 coding upstream 310470 34012757 ~ 34183355 (+)
slc4a1ap NA coding upstream 644316 33831270 ~ 33849509 (+)
LOC103040539 LOC103040539,LOC108423401,LOC108270190 coding downstream 3893 34637839 ~ 34643223 (+)
LOC103040842 LOC103040842,LOC108423400 coding downstream 14118 34648064 ~ 34660780 (+)
kcnk5 kcnk5 coding downstream 71092 34705038 ~ 34735575 (+)
LOC103028138 gnmt,LOC107748599,LOC107566124,LOC107706413,LOC107553737 coding downstream 133116 34767062 ~ 34786115 (+)
LOC103028446 LOC108423447,LOC108269492 coding downstream 153404 34787350 ~ 34792462 (+)
LOC111193252 NA non-coding upstream 174409 34271932 ~ 34319416 (+)
G85591 NA non-coding upstream 540452 33854317 ~ 33953373 (+)
G85602 NA non-coding upstream 544559 33946197 ~ 33949266 (+)
LOC111193250 NA non-coding upstream 564700 33926162 ~ 33929125 (+)
G85596 NA non-coding upstream 602243 33891012 ~ 33891582 (+)
G85709 NA non-coding downstream 2560 34636506 ~ 34637200 (+)
G85834 NA non-coding downstream 561970 35195916 ~ 35196276 (+)
G85835 NA non-coding downstream 577661 35211607 ~ 35218417 (+)
G85845 NA non-coding downstream 697288 35331234 ~ 35331537 (+)
G85842 NA non-coding downstream 708411 35342357 ~ 35349126 (+)
LOC103037843 pnrc2,LOC108441235 other upstream 2052507 32436217 ~ 32441318 (+)
LOC103035447 vegfa,vegf,LOC106584182 other upstream 2275063 32199183 ~ 32218762 (+)
G85189 NA other upstream 2669437 31823586 ~ 31824388 (+)
LOC103034273 LOC103034273,LOC108415529 other upstream 2688422 31749703 ~ 31805403 (+)
pnisr pnisr,LOC102782257 other upstream 3024269 31454984 ~ 31469556 (+)
G85740 zdhhc14 other downstream 112868 34746814 ~ 34800377 (+)
tfb1m tfb1m,cldn20,LOC101886267,LOC107571061,LOC107675320,LOC107573130,LOC107728965,LOC108443299 other downstream 654269 35288215 ~ 35339832 (+)
LOC111193254 NA other downstream 1002864 35636810 ~ 35658087 (+)
LOC111193255 NA other downstream 2850075 37484021 ~ 37503882 (+)
bcl11b bcl11b,bcl11ba,LOC108270293,LOC107588284 other downstream 3195809 37829755 ~ 37933289 (+)

Expression


Co-expression Network