LOC103044274 (LOC108425589,LOC108269650,LOC107697665,LOC107719518,LOC107563387)


Basic Information

Item Value
gene id LOC103044274
gene name LOC108425589,LOC108269650,LOC107697665,LOC107719518,LOC107563387
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 359136 ~ 369003 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022672539.1
gctccgctgattggctgtttcttctcaaaggcgggactttctccttgaaccggcaccacgattggtttaGAGGCACACCGCGGTCAGTGCCCCGTATCCTTAATAAtaacgttttttaaatttcaacataatacgggaaatttacgggaaagtactaatacgggaggacggcgggaacgaggagtaaaatacggtagtttcccggccaaaacgggagacttgacaggtatgcagtAACTGAAGAGCGCGTGTTCATCttagagtcgccaaaagtctccaataacaccacaaaaactcgttagatttgtcgctagtcgcttttttacaaaaaaaaagtcgctggagggtctgaaaagtcgctaattatagcgacaaagtcgctaagttggcaacactgcttGTCCTCACTTGACGTTACCCTGACGTTACAGGGAGGGGACGGGGACAGCAGCCTGGCTGAGTGCTGAGTCCCTCCCACTCTGACTGGTGTGGACAGATGTGGAGTGGTGGATGTAGTGGAGGAAAGGTGGAGGAGTGGAGTGGAGGATGTGGTTTACTGGTTTACTGTGAGGGACTGGGCTTTTCCTGAAGGGTTTGGACAGACTGTTCAGTTTTGTACCACATGCTCCGCAGAATAACGCCTGTTATTACAGAGGCAGAGTCATGCCTGGACCAGCAGCTACCTGCTTACTGAGGATGTGATCGGCTCCACAGAGACGGTTTGAACGGGTGTCATGGACTACCTCCTGAACGAAACCTGGAGAAACACCACTTCCAGCATGCCCCCAGCTTccccttcctcttcctccttcagTGGACTGGACCTTCTGATGGAGCTGAAGCCGCTGTTTGTCCCTCTTTACGCCATACTGGTGCTGGTGGCCTGCTCTGGGAACCTCTTCCTGCTGTTCCTCATCAGCGTGAACAGGAAGATGCACAGCACCACCAACTTCCTGATTGGAAACCTGGCGCTGGCTGATTTGGTGATGTGCCTGTTTTGCGTTCCGCTGACGGTGTTTTACGCTTTCGATGAGCGCGGCTGGGTTTTCGGACACTTCATGTGTCGCTTTGTGACGCTGATGCAGACCGCCACCGTCTTCGCCGCGGTCTTGTCGTTGACGGCGATTGCGGTTGACCGATACGTGGTGGTGGCGTATCCCATTCGCCGGCGCGGTGGACGCCATTTCTGTGCCGGCCTGGTGCTGGGAATATGGCTGTGTGCCCTGGTCATGTCCACCCCTGCCGCCCTCCACACGGTTTACCTGGACCTGAGTGCCACGGGTCACCACATGGCCGTCTGTGAGGAGTTCTGGCAAGGCCAAGAGCTTGGTCGACTCATCTACTCCTGCTTCTTCCTGCTCTTGTCTTATTTTGTCCCTTTGGCGGCCGTGACGATATCCTACTGTGCCATCTCCCACCACCTCCGCCGCAGGGCTGGGCCCGGTCTGATGGCTGCCATTCCCTCCAACCAGGAGAAATGGGGTCGCAAACGCCGCAAGACCTTCCGGCTGCTGCTGGTGTCCGTGCTGTGCTTCGCCTTCTCCTGGCTGCCGCTGCAGGTCGTCAACCTCATCCGCGACCTCGACACCGACTTCATCATCCTCAGCAAGAACCACATTAACGTCATCCAGGTTTCCTGCCACCTGCTGGCCATGAGCTCCGCCTGCTTCAACCCCTTCATCTACGCCTCCCTGCACGACAAGTTCCTGGCCTACCTGTGCCGCCACATGTTCCAGAGAGGGAGGCACCATCAAACCCAGAGCAGCTCCACCACCTCCAGCCGCCTTCCCCGCCAGCACACCAGCACCACCCTGGCTGACATTCCCATGGTCGTTGGAAAGCTGCTACAAGACGGAATATGACCGTAGATCATTTTCCGCGGATCTACAAAGCTCTACTAACTAGCGCGGGGGTGCATGAACAGTTTGAAATGTTTATTTCATCAGGGTGAACTTATCAGGGGAATTAGAGACACCAATTAGAGCCATCGCAGGCTCCTCCAAAACATCATGCACACCATGCATTCCTAAAGGTGTGATGTGTTTTCAGAAAAGGCATCCTTGCACACATGGAGGATTGATATTTGAATTCTTTGAAAATATGGAGTGATTGGGAGTCCTGTGTTCAATATTGTATTTGGATATTCAGAGGCAATCATGAAGGATGAGGATGGACCACCTCGTACACCTCGTAAGATCAGTACAAGAACACGGCCTGCATATTTGACAGATTTACTGTTGATCAAtgacaagaaaaacaaaaatgacacaaaaaaatccTACCTAAAATTGGTTCTTTGACCGGAGCAGAACCCTTTTTGTTGCTGGATGTAAATGTTATGAGTtatgatgtaaaagtttggaaGGAGGACCATTGTTGTAGAGCTGCAACGATTAATCGATATAATCTACATAATCAACagtgttgattatttaaacatttcttgactacagattttattgttgattaattgttaatttaaaaCAGTACCACatgtgctggggac

Function

NR:

description
PREDICTED: prolactin-releasing peptide receptor-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0006935 chemotaxis biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004950 chemokine receptor activity molecular_function
GO:0004983 neuropeptide Y receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022672539.1 True 2506 mRNA 0.51 2 359136 369003

Neighbor

gene id symbol gene type direction distance location
ccdc32 cunh15orf57,LOC103043985 coding upstream 4156 352153 ~ 354980 (+)
disp2 disp2 coding upstream 21189 321307 ~ 337947 (+)
degs2 degs2,LOC107697737,LOC107733197,LOC107674056 coding upstream 170002 178406 ~ 189134 (+)
tpp1 tpp1 coding upstream 185267 163028 ~ 173869 (+)
apob NA coding upstream 283251 52801 ~ 75885 (+)
itpka itpka coding downstream 101510 470513 ~ 495668 (+)
LOC103041189 si:dkey-13p1.4,LOC103041189,LOC108436737,LOC107697687,LOC107674053,LOC107733120,LOC107719509,LOC108269552 coding downstream 277896 646899 ~ 651689 (+)
adprhl2 adprhl2,LOC107697751,LOC107674064,LOC107594801,LOC107719508 coding downstream 292536 661539 ~ 666304 (+)
cinp NA coding downstream 298202 667205 ~ 671575 (+)
nubpl nubpl,LOC107719449,LOC107697759,LOC107561549,LOC107733195,LOC107674123 coding downstream 385236 754239 ~ 761723 (+)
G76976 NA non-coding upstream 1023 238265 ~ 358113 (+)
G77008 NA non-coding upstream 106605 252010 ~ 252531 (+)
G76995 NA non-coding upstream 127014 222531 ~ 232122 (+)
G76992 NA non-coding upstream 155544 197871 ~ 203592 (+)
G76984 NA non-coding upstream 189633 169213 ~ 169503 (+)
G77033 NA non-coding downstream 14042 383045 ~ 383284 (+)
G77035 NA non-coding downstream 38980 407983 ~ 501997 (+)
G77041 NA non-coding downstream 54073 423076 ~ 482930 (+)
G77049 NA non-coding downstream 88900 457903 ~ 467900 (+)
G77048 ivd,LOC107719458,LOC107733087 non-coding downstream 90265 459268 ~ 465132 (+)
ldah ldah other upstream 225833 84719 ~ 133303 (+)
G77059 NA other downstream 150630 519633 ~ 520590 (+)
G77154 NA other downstream 262711 631714 ~ 632372 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other downstream 514294 883297 ~ 935678 (+)
G77212 NA other downstream 636126 1005129 ~ 1008842 (+)
G77410 NA other downstream 1115667 1484670 ~ 1485050 (+)

Expression


Co-expression Network