LOC107197738 (ywhaqb,LOC108436740,LOC107733143,LOC107752793,LOC107592764,LOC107697768,LOC105896734)


Basic Information

Item Value
gene id LOC107197738
gene name ywhaqb,LOC108436740,LOC107733143,LOC107752793,LOC107592764,LOC107697768,LOC105896734
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 1304067 ~ 1318118 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022672563.1
ggagagagctgattggctgggaGGGTGTGCGCAGCGACGGCCTACAGCAACACTTTCGGTTGATGGTGactaatgcatttttttcatcATCCATCCGAGTGTAAAGAGGATCAGTCCGGCGGAGCGGATATATCACCCTCACTGCACAGCTTCCCTGAAGACCTAGGAGGAACCTGGTTCACTCCACTCATTTGATTAGCCAGCTATCAAATCTCTTATCTTCTCCAATCGCTTGGAAGGCTTTCGTGGCCCATAGACTTTTGTTGCGACAAGCAAACATAAATTAAGAAATCTAGAACAGAATGGATAGAACAGAGCTTATTCAGAAGGCCAAGTTGGCAGAGCAAGCTGAGCGCTATGATGACATGGCAGCTTCCATGAAGGAGGTCACCGAGGCTGGAACCGAGCTGTCGAACGAGGAGAGGAACCTGCTGTCCGTCGCCTACAAGAACGTGGTGGGTGCCCGGAGATCAGCCTGGAGGGTTATATCCAGCATTGAGCAGAAGACCGAGGGGAACGACAAGAAGCTTCAGATGGTGAAAGAGTACCGGGAGAAAGTGGAGTCTGAACTCAAAGAAATCTGCAACGATGTTCTGgagcTGTTGAACAAATATTTAATTGAAAATTCCACAAATCCTGAAAGCAAGGTTTTCTACCTGAAGATGAAGGGAGACTACTACAGATACCTTGCTGAAGTCGCCTCTGGAGACGataagaaagCCACCATAGAGAATTCTCAGGATGCATACCAAAAGGCGTTCGATATCAGCAAGACAGAGATGCAGCCAACACACCCCATTCGCCTGGGGCTGGCCCTGAACTTCTCCGTCTTCTTCTACGAGATCCTGAACTCTCCAGAGAAGGCCTGCTCCCTTGCTAAGCAGGCGTTTGATGAAGCCATTGCTGAGCTCGATACACTGAACGAAGAGTCTTACAAAGACAGCACCCTCATCATGCAGCTGCTAAGAGACAATCTCACATTATGGACATCGGACAACGCAGCGGATGAGGGAGAGGGCGGCGACggaggagaaaactaaggaGGAAAACTGATGAGGAGGAAAAGAAAACCTTTTTACACATCTCCATTCCTTATTACTCTACCTTAATTCTTctagtaaaggaaaaaatattgtcattcgaGAGCTGtttatgaaaacacacacacacacacacaaaaaaaatccaatcatTGAGTCTTTTCACAGTGCAGCTTTtggatgaggagagagagagatattaatgattaattggGGCGAGAGACCTTCCATTCCTTGGTTTGTGTTTGTCCTGGTCTTCTGTTGCGTGCCGTCTCTGCTGTAGAAAAGTATGACTAGCTTTGTTTTATACCAGcgtcttaaaaaaaatgagttaaataaaaaagacaacaaaGATTAAAGACTAAAGACATGCATTTCAttagatttgtgtttttttttctcttctcagtTGGTATGTTTAAGACTTGTTGCAGGGATATTTAAAACTTTAGATAACGGTTCTCTCACACGCGTATATTGTTCTTATATATcaccgtatatatatatatatatatatatatatatatatatatcatggtTGTCAACTGCTCAAGTCAGTTATGTGCTATGGGTAATGCCACTGAAATAAATCCATGATGATTCTCACTTCTTACttctaatgataaaaaaataaaaaagaactcaCAAGACTGCCACGTAAAGAAAACTGAAGATACCAATTTAATCCAGTGCGATTTTTACTTTAGGAGAGCgatgtgtgtgtagtttgtggATGCCATCATATGATGCGTTTGCTTAGTGTTTTTGGTAAAATATTTACTCCGCGTTCTTTCTTTCCATAATGCCGTTAACACTTGTGTGGTCGCTTTCGCTTGTGGATTTTCCACGGAGAGGATTTGGAAGCACAGATTTGGTTGTTATGTTGTGAATTGGAGTGAGGTTTAGGACTTTGTTAAAGTAGTAGGAGTGTTGAGGATCTGTAGAACAGTTGTTTGTAGTGACACTGTTGTTACCAATGACACTCCTGATTAGTTTATCACAAACTGGCGGCACCCGAGCCCTCGGTGTATGCGTGTATGGGAGTATGGGTATTTGGGTGTATGTATTCAGCAGGGCATAATTCCGCACAACATTTAGATTAGAACCCTCTTTCCTAGTTTGAACTTGCTTATTTAGTGTACGTGAGCATGTGTGACCTGTGACATATGTGACCTATATTAGTATATCTCTGCAGCGTTTCACTACTGAACATGGCCAAATCAACTGACGTCTCACTGTTTGGtgatttttccttttcctttattttcctttatttttgtttgttgctTTTGATGGCTGCTTTAAAAGCTCAAAGCTCACATCCCACTGTGGTTATGATGATGCGCATTTCACCTAAAGCATGAATCGGAACGGGAGTGGAACGGCAGTTCGGCACTTAAGAGAATTAGAGCTAAATAAACGATGGAAGCTGAATTGGGTATCGATCCATGCATGTCTTTGTTTATTAAGTACAAGATGGAATGGGAATTGGCACACGTGCCAAGATCAGGGTCCAGTTTAGAACTTTTCATTGCAGATTTGTGCACGTGTGAGGGTGCGTTGTTGTCCAGTGAGTGTTTGGAATAGATTTGGACCACTTATTCTGTTTTGCTAATCCTCAATTGTAGTCTCCAAAAGCCTTGTGGACATGTTTTACTCCCTGTGTAACACTTatgtaacattaataaaattttataaaccAAA

Function

symbol description
ywhaqb Predicted to enable monooxygenase activity. Is expressed in several structures, including nervous system; optic vesicle; pleuroperitoneal region; solid lens vesicle; and tail bud. Human ortholog(s) of this gene implicated in transitional cell carcinoma and vulva squamous cell carcinoma. Orthologous to several human genes including YWHAQ (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta).

NR:

description
PREDICTED: 14-3-3 protein zeta/delta-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0004497 monooxygenase activity molecular_function
GO:0019904 protein domain specific binding molecular_function

KEGG:

id description
K16197 YWHAB_Q_Z; 14-3-3 protein beta/theta/zeta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022672563.1 True 2744 mRNA 0.42 6 1304067 1318118

Neighbor

gene id symbol gene type direction distance location
LOC103043042 LOC108436743,LOC108269478,LOC107752797,LOC107733148,LOC107697766 coding upstream 100925 1187120 ~ 1203142 (+)
adam12 LOC108436745,LOC108270250,LOC107752796,LOC107697763,LOC107592760,LOC107733079 coding upstream 124430 1038874 ~ 1179637 (+)
LOC103042422 LOC107594852 coding upstream 270501 1015833 ~ 1033566 (+)
eef1akmt2 mettl10 coding upstream 465914 834977 ~ 838153 (+)
arhgap5 arhgap5,LOC107594795,LOC107733129,LOC107719447,LOC107561551 coding upstream 489377 776124 ~ 814690 (+)
gcfc2 gcfc2 coding downstream 1301 1319419 ~ 1329088 (+)
LOC103037734 LOC105015678,LOC106588052 coding downstream 151897 1470015 ~ 1479658 (+)
mthfd1 mthfd1,LOC108269612 coding downstream 180004 1498122 ~ 1514730 (+)
plcb2 plcb2 coding downstream 263638 1581756 ~ 1617335 (+)
ankrd63 NA coding downstream 326950 1645068 ~ 1647692 (+)
G77259 NA non-coding upstream 37993 1265837 ~ 1266074 (+)
G77245 NA non-coding upstream 65261 1238344 ~ 1238806 (+)
G77214 NA non-coding upstream 253125 965814 ~ 1050942 (+)
G77215 NA non-coding upstream 326615 970551 ~ 977452 (+)
G77198 NA non-coding upstream 366834 936248 ~ 937233 (+)
G77375 NA non-coding downstream 25978 1344096 ~ 1345264 (+)
G77376 NA non-coding downstream 27225 1345343 ~ 1349654 (+)
G77373 NA non-coding downstream 49984 1368102 ~ 1368585 (+)
G77399 LOC103037189,LOC108269635,LOC106588122 non-coding downstream 130706 1448824 ~ 1452208 (+)
G77402 NA non-coding downstream 145120 1463238 ~ 1464202 (+)
G77212 NA other upstream 295225 1005129 ~ 1008842 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other upstream 368389 883297 ~ 935678 (+)
G77154 NA other upstream 671695 631714 ~ 632372 (+)
G77059 NA other upstream 783477 519633 ~ 520590 (+)
ldah ldah other upstream 1170764 84719 ~ 133303 (+)
G77410 NA other downstream 166552 1484670 ~ 1485050 (+)
c9h15orf52 NA other downstream 210852 1528970 ~ 1563180 (+)
G77471 bub1b other downstream 375238 1693356 ~ 1696981 (+)
zfyve19 zfyve19 other downstream 379847 1697965 ~ 1708297 (+)
LOC103033080 akt1,zbtb42,LOC107716055,LOC106610857,LOC106582697 other downstream 594414 1912532 ~ 2009418 (+)

Expression


Co-expression Network