spint1


Basic Information

Item Value
gene id spint1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 1734621 ~ 1752108 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022672577.1
TGAATTTCACTTCCTGTTACTCAGGTATCGGGACACACCTGAACAACAGCAGAGAACGTCATTTTTTCTAAGAAGCTCCGGATTAAACTCCTGATTAAACTCCTGATTACCGCTGGTGTTTGGGGGAGTCTCGGAGAGGAGCGGCTGTGGACGGAGGAAGACTTTGATGTGGACAGTAGACAAGATAACGAGGAGCTCATCTTCACCTCGCTAAAAACACGGTTTCGCCTCAGGGCCACACAGAGGAAACTCCAGCCCGCagtgacacagagagacagagagacagtaatACAGAGAGACATGGCTCTCCACCGGCTGTGTCTTCTGGCCGTCGTCCTGTCGGTTCTTCTGCTGGATGTCTCCGAGGCGCAGGAGTCTCCTCAGCAGTGCATGTCTAAGTTCACTCAGGGGAAGGACGGCTTTGTGCTGGATACGGACGAGTCTGTGAAGGAGGGAGCCACGTTCCTCTCCTCCCCGCAGGTCAGCACGGTGTCGGAGTGCGTGAGCGCCTGCTGCTCGGACCCCAACTGCAACCTGGCCCTGATTGAGAGCACCAGCGAGGAGAGCACCATCCACGCCTGCTTCACCTTCAACTGCCTCTACAAGCAGAAGCAGGTGTGCAGATTCGTCAGAAAGACGGGCTTCAAAAACTACCTCCTCAACTCAGGAGTGTTCAGGAGTTACCTTCAGGATATTCCCTCGActCAGGAAGATAAGCCTCCGAAAGCTAAAGCAGGGCAGGACCGAGTGATCCAGCCTAACGAAGTCGTGACTCTCAACGGCATCGAAAGCAAAGACGACCATAAGATTGTGGACTTCAAGTGGACTCTGGTGTCTGGAAACCCCTCTGCTGTCATTGAGAAATCTCATTTTCCGGATCAAGTGACCGTGTCTAAACTGACCGCTGGGGTTTATAAGTTCAGGCTGACTGTAACGGATAACGTAGGGCAGTCGGACTCTACAGAGATCACCGTCCTGGTCCTTACACCGGAACAGACGCACCATCATTGTCTGGTGCCGAAGAAGGCGGGGCCGTGTCGGGGGTCCTTCCCTCGCTGGCACTATAACGCAGCGTCAGAGAAGTGTGAGGAGTTCACCTTCGGCGGCTGCAAAGAAAACCGTAACAACTATCTGTCCCGAGAGGAGTGCCTGAATGCCTGCGATAAAGTCTCAGttttgaATAATTCTACATTAGGAAGACATGGACCGATTGATCTTCCAAGTGAGCAGTGTGGAGTTCCCTGTGGAGCAGAGACCTTCGTCTGTGCTAACGGATGCTGCATAGATAAGGAGCTTGAGTGTGATCAGACCAAGCAGTGCAGTGATGGATCTGATGAGGAGCAGTGTGACAAATTGGGATCGAAGTTTCGCAGATTGCTTGACATACCTGTGGATGTGGATAAAGCTCGTTGCACACAGCCTCCAGTTACAGGACCTTGCCGGGCGAGCTTTACTAAGTGGTACTACAATCCGTACGATAGAAAATGCAACCGCTTCAACTACGGGGGCTGCCAGGGCAACGATAATCAGTTTGAAACACAGGACCACTGCATGAAGGTCTGCACTGGTGTGACCGAAAGTGACGTCTTTCTCAGATCGGCAGCTTTTGAGAAGCAGACAGGAGAAAACAATACAGCCGCCATTGGCATAGCTGTGGCGCTGGGCCTGGCCATCCTGGTCTTGGTGGCTGTGATTGGCTACTGCTTGCTGAAGGGCAAGAAGAAGCCAAAGCACCAGCGCGTCGCCGTCAACGGTGCCCACTCCTTCCCGATAGAGGACACGGAGAAACTGGTCTACAACAGCACCACAAAACCCATCTGATCCACCTCCCATACCTCACCTCCATGTTCACCACTCTGCACCAGTGCTGCCCATTCCCAACGCTGGGAACTCACTGTTTTCCATGAGCTAATTAAGCTTAGATCTTTAGTAGCCGTCATATTAGACCACTGTAAAATCATGAAACCATTCACAACCAGTGAGCCACCAAAACTGGGACTGACCCAGTGCTCTGCACACATCCCAGAACCTCCTGGAAACTTGGGAATGCTTTTAAACGATTTAGTGTgaacttcttcttttttttcatttgtttttgtagtttttaaaattgtatttgttttattatttgtctcTTGGATCGaatactttctttaaaaaaaagaaaaggagaaaaatgaaagGTGTTGAAGAGTTCTTGGAGTAAAACCATAGAACAGGgttctttagtttagtttaaacaTGCCCACTAATTCTAGTAGTTCTAGCAGATGTTTGAGGAGCGAAATCGCCAAATTCAGCAGGGATCTAAAAAGGTTTGGAATAGAATTGAAGAACCCTAGTGtagaagaaccatttttggCTCCTAAA
>XM_022672578.1
TGAATTTCACTTCCTGTTACTCAGGTATCGGGACACACCTGAACAACAGCAGAGAACGTCATTTTTTCTAAGAAGCTCCGGATTAAACTCCTGATTAAACTCCTGATTACCGCTGGTGTTTGGGGGAGTCTCGGAGAGGAGCGGCTGTGGACGGAGGAAGACTTTGATGTGGACAGTAGACAAGATAACGAGGAGCTCATCTTCACCTCGCTAAAAACACGCAGGTTTCGCCTCAGGGCCACACAGAGGAAACTCCAGCCCGCagtgacacagagagacagagagacagtaatACAGAGAGACATGGCTCTCCACCGGCTGTGTCTTCTGGCCGTCGTCCTGTCGGTTCTTCTGCTGGATGTCTCCGAGGCGCAGGAGTCTCCTCAGCAGTGCATGTCTAAGTTCACTCAGGGGAAGGACGGCTTTGTGCTGGATACGGACGAGTCTGTGAAGGAGGGAGCCACGTTCCTCTCCTCCCCGCAGGTCAGCACGGTGTCGGAGTGCGTGAGCGCCTGCTGCTCGGACCCCAACTGCAACCTGGCCCTGATTGAGAGCACCAGCGAGGAGAGCACCATCCACGCCTGCTTCACCTTCAACTGCCTCTACAAGCAGAAGCAGGTGTGCAGATTCGTCAGAAAGACGGGCTTCAAAAACTACCTCCTCAACTCAGGAGTGTTCAGGAGTTACCTTCAGGATATTCCCTCGActCAGGAAGATAAGCCTCCGAAAGCTAAAGCAGGGCAGGACCGAGTGATCCAGCCTAACGAAGTCGTGACTCTCAACGGCATCGAAAGCAAAGACGACCATAAGATTGTGGACTTCAAGTGGACTCTGGTGTCTGGAAACCCCTCTGCTGTCATTGAGAAATCTCATTTTCCGGATCAAGTGACCGTGTCTAAACTGACCGCTGGGGTTTATAAGTTCAGGCTGACTGTAACGGATAACGTAGGGCAGTCGGACTCTACAGAGATCACCGTCCTGGTCCTTACACCGGAACAGACGCACCATCATTGTCTGGTGCCGAAGAAGGCGGGGCCGTGTCGGGGGTCCTTCCCTCGCTGGCACTATAACGCAGCGTCAGAGAAGTGTGAGGAGTTCACCTTCGGCGGCTGCAAAGAAAACCGTAACAACTATCTGTCCCGAGAGGAGTGCCTGAATGCCTGCGATAAAGTCTCAGttttgaATAATTCTACATTAGGAAGACATGGACCGATTGATCTTCCAAGTGAGCAGTGTGGAGTTCCCTGTGGAGCAGAGACCTTCGTCTGTGCTAACGGATGCTGCATAGATAAGGAGCTTGAGTGTGATCAGACCAAGCAGTGCAGTGATGGATCTGATGAGGAGCAGTGTGACAAATTGGGATCGAAGTTTCGCAGATTGCTTGACATACCTGTGGATGTGGATAAAGCTCGTTGCACACAGCCTCCAGTTACAGGACCTTGCCGGGCGAGCTTTACTAAGTGGTACTACAATCCGTACGATAGAAAATGCAACCGCTTCAACTACGGGGGCTGCCAGGGCAACGATAATCAGTTTGAAACACAGGACCACTGCATGAAGGTCTGCACTGGTGTGACCGAAAGTGACGTCTTTCTCAGATCGGCAGCTTTTGAGAAGCAGACAGGAGAAAACAATACAGCCGCCATTGGCATAGCTGTGGCGCTGGGCCTGGCCATCCTGGTCTTGGTGGCTGTGATTGGCTACTGCTTGCTGAAGGGCAAGAAGAAGCCAAAGCACCAGCGCGTCGCCGTCAACGGTGCCCACTCCTTCCCGATAGAGGACACGGAGAAACTGGTCTACAACAGCACCACAAAACCCATCTGATCCACCTCCCATACCTCACCTCCATGTTCACCACTCTGCACCAGTGCTGCCCATTCCCAACGCTGGGAACTCACTGTTTTCCATGAGCTAATTAAGCTTAGATCTTTAGTAGCCGTCATATTAGACCACTGTAAAATCATGAAACCATTCACAACCAGTGAGCCACCAAAACTGGGACTGACCCAGTGCTCTGCACACATCCCAGAACCTCCTGGAAACTTGGGAATGCTTTTAAACGATTTAGTGTgaacttcttcttttttttcatttgtttttgtagtttttaaaattgtatttgttttattatttgtctcTTGGATCGaatactttctttaaaaaaaagaaaaggagaaaaatgaaagGTGTTGAAGAGTTCTTGGAGTAAAACCATAGAACAGGgttctttagtttagtttaaacaTGCCCACTAATTCTAGTAGTTCTAGCAGATGTTTGAGGAGCGAAATCGCCAAATTCAGCAGGGATCTAAAAAGGTTTGGAATAGAATTGAAGAACCCTAGTGtagaagaaccatttttggCTCCTAAA

Function

GO:

id name namespace
GO:0008544 epidermis development biological_process
GO:0030593 neutrophil chemotaxis biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K15619 SPINT1; Kunitz-type protease inhibitor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022672577.1 False 2370 mRNA 0.49 11 1734621 1752108
XM_022672578.1 True 2373 mRNA 0.49 11 1734621 1752108

Neighbor

gene id symbol gene type direction distance location
ankrd63 NA coding upstream 86929 1645068 ~ 1647692 (+)
plcb2 plcb2 coding upstream 117286 1581756 ~ 1617335 (+)
mthfd1 mthfd1,LOC108269612 coding upstream 219891 1498122 ~ 1514730 (+)
LOC103037734 LOC105015678,LOC106588052 coding upstream 254963 1470015 ~ 1479658 (+)
gcfc2 gcfc2 coding upstream 405533 1319419 ~ 1329088 (+)
LOC103033947 LOC107560184,LOC107678711,LOC107726575 coding downstream 53839 1805947 ~ 1831095 (+)
LOC107197725 LOC108430641,LOC108269631 coding downstream 84681 1836789 ~ 1854878 (+)
dnajc17 dnajc17 coding downstream 335505 2087613 ~ 2146276 (+)
fsip1 NA coding downstream 494943 2247051 ~ 2312662 (+)
LOC103026471 LOC100304858 coding downstream 713202 2465310 ~ 2468562 (+)
G77457 NA non-coding upstream 79106 1654012 ~ 1655515 (+)
G77447 NA non-coding upstream 116294 1578277 ~ 1618327 (+)
G77396 NA non-coding upstream 214626 1517762 ~ 1519995 (+)
G77413 NA non-coding upstream 240186 1494160 ~ 1494435 (+)
G77411 NA non-coding upstream 248300 1485833 ~ 1486321 (+)
G77484 NA non-coding downstream 5056 1757164 ~ 1771913 (+)
G77493 NA non-coding downstream 114987 1867095 ~ 1869007 (+)
G77510 NA non-coding downstream 274582 2026690 ~ 2030616 (+)
LOC103031311 inf2,LOC107678755 non-coding downstream 309005 2061113 ~ 2066854 (+)
G77531 NA non-coding downstream 432761 2184869 ~ 2185952 (+)
zfyve19 zfyve19 other upstream 26324 1697965 ~ 1708297 (+)
G77471 bub1b other upstream 37640 1693356 ~ 1696981 (+)
c9h15orf52 NA other upstream 171441 1528970 ~ 1563180 (+)
G77410 NA other upstream 249571 1484670 ~ 1485050 (+)
G77212 NA other upstream 725779 1005129 ~ 1008842 (+)
LOC103033080 akt1,zbtb42,LOC107716055,LOC106610857,LOC106582697 other downstream 160424 1912532 ~ 2009418 (+)
LOC103031026 NA other downstream 706337 2458445 ~ 2464321 (+)
G77722 NA other downstream 1148026 2900134 ~ 2978094 (+)
traf3 traf3,LOC107719479,LOC107694716,LOC107733154,LOC107590913 other downstream 1569977 3322085 ~ 3359744 (+)
g2e3 g2e3 other downstream 2013672 3765780 ~ 3824872 (+)

Expression


Co-expression Network