fsip1


Basic Information

Item Value
gene id fsip1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 2247051 ~ 2312662 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022672590.1
CCGAACTCGCTACAAACAGGAACCCGGGATCTGAGCGGACCTTCAGTAACAGCAGCGCAGCTCGAGTTACTGAATTATATTCAGCACATTTTCACGGTAGAGATTATTTCATGGACATCACTAAGGGCATTCTGGAGGAGATCTCTCGGCCAGCCTCCAGTGAGCGCTCTCGACCGGGCAGCCGTGTGTCCAGCATATCTCTCTCTGAACTGGGAAGAGTGAGTGTGGAGAGCCCGAGGTCTCTGGAGGTTCTGAGCACAGAAACTCCATCAACACAGGCAgACAGTGGAATTGAGAAGGATGAGGATTTAGACTGCCCTTCAGAAAACTCAGCCCCCGGTCAGGATGTCTCTGATGAAGAGACTGAAGATACCCAGTTGCAGAAAGCCattaagaaaatgaaaagacTGGATAGAAGACTGGCTCTGGCGATTCGCAATGAAGAAGAGGTGAAAAAGCGAGGGAGGGAACTTCATCAGAAACTCTGGCAAGAACTGCAGgaTCTTAAATCTGAAATGAAGGCAGAGTGCAGTGACCAGGTAGAAAACACACGGTCGTTTTTGGCACTAATGTCCAGCAGCTCTTGCAGTGAGGAGATGGAGTTTGTACCTGTGTTTGGGACCCAGGTTCCAGATGAAAGCACTGCATCATGCCCCCTGAGCCGGGAGAATAAAGAGGTCGGAGGTCACGCTGAGTCTTCAGGCTCTCTAGATGGAGGTCGGAAGGTGAGGCAAGAcaagcagacagacagcagaGAGACCACAGACGGCAACAGCAAGCACAGACAAGATTTCATCCAAACAAACATCGAGCTTGCAGGTGACGCAGTGCGTATGACTCAGAGGGAGAAAGAGCGCTTACAGGAGCTCCTCAAGGAcatagaagaagaagaggaggctTATGATGACCCACTGGCCAACCCTGAGCTTGCAGGTGATGTGGGGAGTGGAGTTTTGActcagaaagaaaaagacagattaAATCAGCTCCTCAGTGACttagacgaagaagaagaagaagattatGATGACCCACTGGCCAGCCCTGagGCAGACTTTTCACTGTGGACTGTGCCCACCACATCTGGTGAGGGTTACACGCCCCAGCCGGCCGAGCTTGACCAGCTCCTTCATATCGATGCCAGACTGCAGCTCCTACTTCCTGTTGAGGACTTCTTCTGTGTGAGAAGCCCATATACTGACCGCAGCCTGACCCAGtgtgggcTGCAGGGTTCGGATGGAGAGCGTGGTGAAGAGCGGCGGCCGCCGGGGGAGAGGGTCCTGAGGGATATGAGGGAGAGCAGAGGGCAGGAGGAACGTCTGCGAGAGatccagcagcagctgcagctcctGGGACTCGGCCAGCAGAGCAGCGTTCTACCTGAAGAGCAGCTACAGCGTCTGCTGGAGGAATGTCAGACGGCCGTGAGCAGATGTTCTCGATTAAGTACAGAGGATTCTTGCCCTGCGCCGTACTGCGCTCTGGAAGGACCCGAGGTGTCTCTGCTGGCCAGCATGCCCTGCCTGTCCAGTtctgctctctcagagctcatGCAGGAGATCTGTGAGGGTGAACATGAAGAGCCCGGGACTGAGAACTGAGAGCTATGATCAGCATGTGCAGGCTGTGATATAATATTAATGATTGATTCTAGactctgatttgaaaaaaaaaaaaaggcatgagTCTACTAGACATCTTAAATGGTGTAAATTCTCAgataaaaattgtgttttgttatttttaccaaaatatTATTGCAAAAATTGCAAAAAGCATTGCCATACTTATGTAAGAGTTACaccttaaactaaaaaaaatgaaaaaatcatgaagaaaaatggaaaaaagtcatttattgCAATTTGATTTATGAGCAGAACATTCCAGTCATATTTTCCCCAAAGTGCTTCTCCTGCTGAAGAGCTTTACCCCCTCTGCATCACGACTAAGTTCACTTTTATCCGTgaatttaaattcaatttaaagTTCAGAGTAAATGTGGTTGTGTAGTTTTTGATTATCAtgtatgtctgttttttttaagggtcattaaaaaaaagtaatcatatttaa
>XM_022672591.1
CCGAACTCGCTACAAACAGGAACCCGGGATCTGAGCGGACCTTCAGTAACAGCAGCGCAGCTCGAGTTACTGAATTATATTCAGCACATTTTCACGGTAGAGATTATTTCATGGACATCACTAAGGGCATTCTGGAGGAGATCTCTCGGCCAGCCTCCAGTGAGCGCTCTCGACCGGGCAGCCGTGTGTCCAGCATATCTCTCTCTGAACTGGGAAGAGTGAGTGTGGAGAGCCCGAGGTCTCTGGAGGTTCTGAGCACAGAAACTCCATCAACACAGGCAgACAGTGGAATTGAGAAGGATGAGGATTTAGACTGCCCTTCAGAAAACTCAGCCCCCGGTCAGGATGTCTCTGATGAAGAGACTGAAGATACCCAGTTGCAGAAAGCCattaagaaaatgaaaagacTGGATAGAAGACTGGCTCTGGCGATTCGCAATGAAGAAGAGGTGAAAAAGCGAGGGAGGGAACTTCATCAGAAACTCTGGCAAGAACTGCAGgaTCTTAAATCTGAAATGAAGGCAGAGTGCAGTGACCAGGTAGAAAACACACGGTCGTTTTTGGCACTAATGTCCAGCAGCTCTTGCAGTGAGGAGATGGAGTTTGTACCTGTGTTTGGGACCCAGGTTCCAGATGAAAGCACTGCATCATGCCCCCTGAGCCGGGAGAATAAAGAGGTCGGAGGTCACGCTGAGTCTTCAGGCTCTCTAGATGGAGGTCGGAAGGTGAGGCAAGAcaagcagacagacagcagaGAGACCACAGACGGCAACAGCAAGCACAGACAAGATTTCATCCAAACAAACATCGAGCTTGCAGGTGACGCAGTGCGTATGACTCAGAGGGAGAAAGAGCGCTTACAGGAGCTCCTCAAGGAcatagaagaagaagaggaggctTATGATGACCCACTGGCCAACCCTGAGCTTGCAGGTGATGTGGGGAGTGGAGTTTTGActcagaaagaaaaagacagattaAATCAGCTCCTCAGTGACttagacgaagaagaagaagaagattatGATGACCCACTGGCCAGCCCTGagGCAGACTTTTCACTGTGGACTGTGCCCACCACATCTGGTGAGGGTTACACGCCCCAGCCGGCCGAGCTTGACCAGCTCCTTCATATCGATGCCAGACTGCAGCTCCTACTTCCTGTTGAGGACTTCTTCTGTGTGAGAAGCCCATATACTGACCGCAGCCTGACCCAGtgtgggcTGCAGGGTTCGGATGGAGAGCGTGGTGAAGAGCGGCGGCCGCCGGGGGAGAGGGTCCTGAGGGATATGAGGGAGAGCAGAGGGCAGGAGGAACGTCTGCGAGAGatccagcagcagctgcagctcctGGGACTCGGCCAGCAGAGCAGCGTTTACAGGCTGACCGCTGTTTTATTTGGGCTCGAGATGATTCAGCCTGCAGTTTGCAAAAGCATGGGAAGAATTTCTGCCTGCCAAACCTTCGGTAAAAATGTTGCAGAAACCGACATGCTCTCAAAACTGGTATGAAGCTGCCTGCATTAAATCAAAGCATCAAATAAATTGtaatcaataaaaacaaatatttcagCCTTACATtgagaaaac
>XM_022672592.1
CCGAACTCGCTACAAACAGGAACCCGGGATCTGAGCGGACCTTCAGTAACAGCAGCGCAGCTCGAGTTACTGAATTATATTCAGCACATTTTCACGGTAGAGATTATTTCATGGACATCACTAAGGGCATTCTGGAGGAGATCTCTCGGCCAGCCTCCAGTGAGCGCTCTCGACCGGGCAGCCGTGTGTCCAGCATATCTCTCTCTGAACTGGGAAGAGTGAGTGTGGAGAGCCCGAGGTCTCTGGAGGTTCTGAGCACAGAAACTCCATCAACACAGGCAgACAGTGGAATTGAGAAGGATGAGGATTTAGACTGCCCTTCAGAAAACTCAGCCCCCGGTCAGGATGTCTCTGATGAAGAGACTGAAGATACCCAGTTGCAGAAAGCCattaagaaaatgaaaagacTGGATAGAAGACTGGCTCTGGCGATTCGCAATGAAGAAGAGGTGAAAAAGCGAGGGAGGGAACTTCATCAGAAACTCTGGCAAGAACTGCAGgaTCTTAAATCTGAAATGAAGGCAGAGTGCAGTGACCAGGTAGAAAACACACGGTCGTTTTTGGCACTAATGTCCAGCAGCTCTTGCAGTGAGGAGATGGAGTTTGTACCTGTGTTTGGGACCCAGGTTCCAGATGAAAGCACTGCATCATGCCCCCTGAGCCGGGAGAATAAAGAGGTCGGAGGTCACGCTGAGTCTTCAGGCTCTCTAGATGGAGGTCGGAAGGTGAGGCAAGAcaagcagacagacagcagaGAGACCACAGACGGCAACAGCAAGCACAGACAAGATTTCATCCAAACAAACATCGAGCTTGCAGGTGACGCAGTGCGTATGACTCAGAGGGAGAAAGAGCGCTTACAGGAGCTCCTCAAGGAcatagaagaagaagaggaggctTATGATGACCCACTGGCCAACCCTGAGCTTGCAGGTGATGTGGGGAGTGGAGTTTTGActcagaaagaaaaagacagattaAATCAGCTCCTCAGTGACttagacgaagaagaagaagaagattatGATGACCCACTGGCCAGCCCTGagGCAGACTTTTCACTGTGGACTGTGCCCACCACATCTGGTGAGGGTTACACGCCCCAGCCGGCCGAGCTTGACCAGCTCCTTCATATCGATGCCAGACTGCAGCTCCTACTTCCTGTTGAGGACTTCTTCTGTGTGAGAAGCCCATATACTGACCGCAGCCTGACCCAGGTTCTACCTGAAGAGCAGCTACAGCGTCTGCTGGAGGAATGTCAGACGGCCGTGAGCAGATGTTCTCGATTAAGTACAGAGGATTCTTGCCCTGCGCCGTACTGCGCTCTGGAAGGACCCGAGGTGTCTCTGCTGGCCAGCATGCCCTGCCTGTCCAGTtctgctctctcagagctcatGCAGGAGATCTGTGAGGGTGAACATGAAGAGCCCGGGACTGAGAACTGAGAGCTATGATCAGCATGTGCAGGCTGTGATATAATATTAATGATTGATTCTAGactctgatttgaaaaaaaaaaaaaggcatgagTCTACTAGACATCTTAAATGGTGTAAATTCTCAgataaaaattgtgttttgttatttttaccaaaatatTATTGCAAAAATTGCAAAAAGCATTGCCATACTTATGTAAGAGTTACaccttaaactaaaaaaaatgaaaaaatcatgaagaaaaatggaaaaaagtcatttattgCAATTTGATTTATGAGCAGAACATTCCAGTCATATTTTCCCCAAAGTGCTTCTCCTGCTGAAGAGCTTTACCCCCTCTGCATCACGACTAAGTTCACTTTTATCCGTgaatttaaattcaatttaaagTTCAGAGTAAATGTGGTTGTGTAGTTTTTGATTATCAtgtatgtctgttttttttaagggtcattaaaaaaaagtaatcatatttaa

Function

NR:

description
fibrous sheath-interacting protein 1 isoform X2

GO:

id name namespace
GO:0120031 plasma membrane bounded cell projection assembly biological_process
GO:0006996 organelle organization biological_process
GO:0120036 plasma membrane bounded cell projection organization biological_process
GO:0044782 cilium organization biological_process
GO:0070925 organelle assembly biological_process
GO:0030030 cell projection organization biological_process
GO:0030031 cell projection assembly biological_process
GO:0060271 cilium assembly biological_process

KEGG:

id description
ko05016 Huntington disease

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022672590.1 True 2076 mRNA 0.48 12 2247051 2312662
XM_022672591.1 False 1589 mRNA 0.51 12 2247051 2294060
XM_022672592.1 False 1920 mRNA 0.46 11 2247051 2312662

Neighbor

gene id symbol gene type direction distance location
dnajc17 dnajc17 coding upstream 100775 2087613 ~ 2146276 (+)
LOC107197725 LOC108430641,LOC108269631 coding upstream 392173 1836789 ~ 1854878 (+)
LOC103033947 LOC107560184,LOC107678711,LOC107726575 coding upstream 415956 1805947 ~ 1831095 (+)
spint1 NA coding upstream 494943 1734621 ~ 1752108 (+)
ankrd63 NA coding upstream 599359 1645068 ~ 1647692 (+)
LOC103026471 LOC100304858 coding downstream 152648 2465310 ~ 2468562 (+)
LOC103026149 LOC108430664,LOC108269450,LOC107567345,LOC107678748,LOC107743909 coding downstream 158736 2471398 ~ 2474791 (+)
LOC103030398 LOC108430666,LOC106610840,LOC105908184,LOC108270264 coding downstream 448008 2760670 ~ 2864439 (+)
eif2ak4 eif2ak4,LOC107673787 coding downstream 595947 2908609 ~ 2957430 (+)
tecpr2 tecpr2,LOC107758275 coding downstream 949129 3261791 ~ 3296653 (+)
G77532 NA non-coding upstream 56387 2190322 ~ 2190664 (+)
G77531 NA non-coding upstream 61099 2184869 ~ 2185952 (+)
LOC103031311 inf2,LOC107678755 non-coding upstream 180197 2061113 ~ 2066854 (+)
G77510 NA non-coding upstream 216435 2026690 ~ 2030616 (+)
G77493 NA non-coding upstream 378044 1867095 ~ 1869007 (+)
G77559 thbs1,LOC107668245,LOC107756566,LOC102310807,LOC101487021,LOC102776654 non-coding downstream 7553 2320215 ~ 2321005 (+)
G77566 acp7 non-coding downstream 87337 2399999 ~ 2452445 (+)
G77569 NA non-coding downstream 98865 2411527 ~ 2422946 (+)
G77575 NA non-coding downstream 138765 2451427 ~ 2477003 (+)
G77711 NA non-coding downstream 389537 2702199 ~ 2713270 (+)
LOC103033080 akt1,zbtb42,LOC107716055,LOC106610857,LOC106582697 other upstream 237633 1912532 ~ 2009418 (+)
zfyve19 zfyve19 other upstream 538754 1697965 ~ 1708297 (+)
G77471 bub1b other upstream 550070 1693356 ~ 1696981 (+)
c9h15orf52 NA other upstream 683871 1528970 ~ 1563180 (+)
G77410 NA other upstream 762001 1484670 ~ 1485050 (+)
LOC103031026 NA other downstream 145783 2458445 ~ 2464321 (+)
G77722 NA other downstream 587472 2900134 ~ 2978094 (+)
traf3 traf3,LOC107719479,LOC107694716,LOC107733154,LOC107590913 other downstream 1009423 3322085 ~ 3359744 (+)
g2e3 g2e3 other downstream 1453118 3765780 ~ 3824872 (+)
G78111 pole2 other downstream 1976845 4289507 ~ 4298184 (+)

Expression


Co-expression Network