LOC103040475 (LOC108423515,LOC108269951)


Basic Information

Item Value
gene id LOC103040475
gene name LOC108423515,LOC108269951
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 28010514 ~ 28072594 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022673097.1
CGGCGGAGTGAGAGAGTCGGTCCTGAAACAGAGCTACTAACGTCATTCAGCTCAGGCCACAACACCACCGAGCGGAACCAGCAGCGCAAACACACAACTTCAGCAGAAATGCCCGCAGCTCGAGGCGGAGAGCAGGGCGAGGAGTGCGGGGTTTAGTGTGCGGTGTGTGTCGCGGGGATCGGGGGGGAGTCGGGCTGTAATGTAGGGCTTTGTGTTTCTTGGAAGGAAATCCCTAAACTTCACCCAGGAGGGGagtgcaggaggaggaggagcaggaggctGTTGCAGTTCAGCAGAGACTGGGTCGGTGCTGCAGCAGCGCTGGAGGAAAGCAATAGCTAGGACTCCGGGTTGGGAAGGAGGCATGGCTGTTTGGGCCTTGGCTTCCAGTGCCCAGAGTCCTGCCCAGGCACTATTGGACAGAGTCGGCAGCTGAGGAAGGGAGATCCTTGCTGGGCCGTAATGACGAAGAGACAAGGACGGCCCTGCAGGTGGAAGTGAAGAAGTGACGAGGAAGAGGGAGGAAGAAGATGGGAGCCAATGCTTCCAGTTACCCACACTCATGCTCCCCCCGCTTTGGTGGAAATGCACAGGCCCAGCAGACATTCATTGGAACATCACTGTACTCGCAGCAGTCATACACTTGGGAGCCGAAGCTCTACAGTCTGGAGCATGTCGGACACGAGAGGCCACTGGACCGGAAGAAGAAGAGCTCAGGCTTGGCCACCCTGAAGCGCAGGTTTATCAGGCGCCGCAGGGCTGGACGCTCAGCAGACCATGCCCGGCAGATGCGGGAGCTGCTCTCAGGCTGGGATGTGCGTGACGTTAATGCTCTGGTGGAGGAGTATGAGGGCACTGCCACTCTTAAAGAGCTGAGTCTGGCCGCTGGCCTGGCCAGGCCCGAGGCGTCCACGCTGCGCTCTGATATGGCCGCCCTGTTCCAGCATAAGCACTGCACGGATGTTGACCTGGTCTTCCAGGGCACCTGTTTCCCTGCCCACAGAGCCATTCTGGCCGCACGCTGCCCTTTCTTTAAGACCTTGTTGTCCTCCACGGGCGCAGCAGCATCAGGCTATGGAGGGGCAGAAGTGATGCTGGATGTGGGCACTGCAGGCATGAACGTGACTCTCTTCTCCGCTCTCTTGCACTTCCTTTACACCGGAGAGCTGGGCGCTGTTCGAGTGGACGAAGCAGAAACACGAATGAGGAACATTGACGTTCTCCGACAGCTGAGCGAAGAGTTCGGCCTGCCTAACCCTCTGGAGGATGACATGAGGATGCTGTTTAACTACATGTCCTACTATGACTCTGTCCTGAGCTTTTGCTCAGACCCTGAACTCGCGGAAGCATGTGACGGGGTGGGGGGTATTAGTGGAGGGGGTATCACCGGAGGCAGCACTGTAAACGGAAGCACCGGAAGCAGCGGGCAGATGCCATCACCCGAGGAGGACCTGAGGGCCCACAAGGCCGTCCTTTCGGCCCGCTCTCCTTTCTTCCGGAACCTGCTGCAGAGGCGGATACGGACCGGCGAGGAGATGACTGAGCGTACGCTGCAGACGCCCACGCTGATAGTGCTGGATGAGTCCATTATCCCGCGGAAGTATGCCCGCGTGATACTGCACTGTATGTACACGGACGTTGTGGACATGTCCCTGGTGCTGCATGGCAGTCCATCTGTGGGCAGTCTGAGTGAGGCACAGGCCTTGCCCGCTGGCAGTGGAGCAGGAAAGGTTGCTGTATCAGTGCGCACTGAAGAAGCCATGGAGCTGTATCACATCGCGCTGTTCCTGGAGTTCAGCATGCTGGCTCAAGGCTGCGAGGACATCATCATAGAGAGCATCTCTCTGGAGTCTTTGGTCTCCATTCTGAAGTGGAGCTCTCAGCCCTATGGCTCCAAATGGGTCCACAGACAGGCCATGCATTTTCTGTGTGAGGAGTTCAGCCAGGTCATGACCTCAGAAGTGCTGTATGAGCTGGTCAAGGATCAACTGCTGGCTGCTATCCAGTCAGACTACCTACAGGCGAGCGAGCAGGACATTCTGAAGTATGTGATTAAGTGGGGCGAGCACCAGCTCATTAGGAGGATGGCTGACCGAGAGCCCAACCTGCTGAGCAGTACAGctcacagtgtgaacaagcgTGGGGTGAAGAGGAGAGATCTGGATGTGGAGGAACTGAAGGAGATCCTGTCTCCTCTGCTGCCTTTCATCCGCATGGAGCACATCCTCCCAGCCAACAGTGACGTCCTCTCTGATGCAATGAAGCGAGGTCTTATCAGCACTCCTCCATCAGACATGCTGCCCACTGCAGAAGGAGGCAAGGCCAACTCCTGGCTCAGACAGAAGAACACTGGCATCTACATGCGCCCGCGCCTCTTTTCTCCATATGTGGAGGAGGCAAAGtgTGTCCTGGAGGAGATGATGGTGGAACAGACCGATCTCGTACGGCTGAGGATGGTGCGCATGTCTAACGTGCCCGACACCCTGTACATGGTCAATAACGCTGTCCCCCAGTGCTGTCACATCATAAACCATCAGCAAATCACCAGCAGCCAAGCAGTGGCCCCGTCCGTTGTGGCCAACGAGATACCAGtgccCAGGCTGGCAGTGGTGAGAGAGATGATTGCCAgactgcaggagctgaggcacACAGACCAGGTTCAGAGAGCGTATGCTCTAAACTGCGGGGAGGGAGCCACGGTCAGCTACGAGCTGCAGCTCCGCGTGCTCAGAGAGTTTGGCCTGCCAGATGGAGCGGCGGAGTTACTTCAGAACCCACAGAAGTTCTTTCCAGAGGAGCGTTTTGGGGACGAGAGTCCTCTCCTCAGTTTGAGAGCGGCTGGCCGCTGCAGAGTGAACAGCTCCCCCGCCATGGAAACTCTGTTCACGGACCTGGAGACCCTGGGGAGTCTTAACCCCCCTCTccctcctccacctcccccATATCACCCTCCATCCATGCCTGGACAGGCTCAGCACAGAGGAGGCTGGAGGCCAAAGGTTCCTGTGCCTCCTCCCTCTCGCTCCTTCTCCTATCCATGTAACCACACCCCTCTCCAGCAGAGAGGCTCAACCGTGCCCAAACCCAGTAGCCAGGCCTACCAGCCTCCTGACTACAGCAAAGCTCAGAGCATGGGAAAAGGACTTCCAGAGTCGTGTGGGAGTTTGGAACCTCTAAGTGATTACATGCCGGACATCGCCCTCGGAGTGTCTGCTATGACCCTGTCAGATCACAGTGAGGCTCAGAACCTCGGCCTTCACTCATGTCCTCATCCAAGTATGGCTTCTTCCATGCCTCACTACCCGACTGGACCCTGCCCTAGTGGAAGACACTCTCTGGCTCATCTTCCCTGCAAAAGACATCCCCCCAAACAAAAACCTGAACTGCAGTCTGAGTATCCAGACCTTTATGACTTCTCCAGTCAAACAGACGCCCCTACATCTAGCCATCCTCCTCAGGCCACCTACACAGGCTCAGACTTGTACGGCCACCGCAGAGGCGCATACAACAGCTTGCACCTCTCGTATCTGCCCGACACTTCCCTATCATTGCACTCCCAGGGCAGGCTAGGACAGCCATCGGACTCCCTTCATTTGGATGTCTTGGGTCAAAGGCTAGACTTGGCCCAGACCTCCTCTGGAGGACCCTCAGTAGGAGGAGCACTTGTGCCCAGTGGGCGCTCAATAAATGACTCTGACCTAATATGTGGTCTTGGACCTTCAAGGGTTGGTGCAGACCCTTATGAGGAGCACACGCCAGTCACAGACGAAACGGGGGGCATGAGGGAGCCCTCTGCAGCGATTGGGCACCACAGGTCCAGTAGTGAAGAAGCAGGGATAAGCCGGGATCACAGGTCACCCAATAAGCCAGAGTACCAATATAAGAAATCTGCACTTTAAATGAGGTGACACAAAGGGAATTGTGATATTAGGACAAAGACTGAAGTCTACTCAAGTCTAGTAGATTGTTAAATCTTGAGAATGGAATGAAGAGAAAactatttgttatttcagaatGTTGTGGAATTTTTAGCATGAGCTAGTTGAGAATGAATGAAGTTTTGTGGTTTTAAATTTCGTGGGTAAGATATGCTGAGAATTAAACGTTGTGTTTTGATTTTCAGTTTTAAACACATTACCTTTTCACACAGAATAATTTAGTTATATGAGGCACAGTGGTTATGCGCAATGATGAGGGAAGCATCAATAAAATATGCCTAACATTgaaaatggggggaaaaatacactaaataaaactCCTACATGAACATAATAAAAGGACATCACTTCCACAGTATATACCCTATAGTTTCCTTCCCTATAGTTTATCTGCCATGTGAAACCTACACAGCTTAGCGAAGAATGCTTTAGGCCACAGGACATTAGGAATATGATCAGTTCTATTGTGGTCATTGTAGGAGGGACAAGGACACTTagggtttttatttttgtggtaGGTTTGGTAATCATACATGTCATAGTTTCTGGGTTTGGACCTGGCAGAAATTTAGAGCTATTATTGCCCATTGTTTTCAGAATCCTGTAGACAGTAGGCGGTCCTCATACTAATCCTTATAGGCAGTAGGCAATCCTtacacaacaaaacaaataagcTTTAAAACCATACTGACTGTTCACAATAGTCCAAAGTTACCTGTTGTTCCTCTAAAACTGTCTAGAATCAGGGCAACTGGTTTTACATGGCCATACCTATAAGCATGATGACCTTACCTCTTCAGTATACATACCATATCTATTGTGCTACagctacgttcacacagcaggtaaaagtggcctaAGTCTGATGTTTTTCTGGGTGTTCACATACTGTCCACACCTTTTAAATGCGACTTGTATCCGACAGTCGTCTGAACAGTTCACAATCCTAATCTGACACTTGTGCAAAAGAGCAACACATCCAGTTTCCAGTTTTTCATCAGCACCACAGAAGCAATCAGGAAACAGGAATTACAGCGGATACTTCATATCCTCCTGTGGCTGcatttgatcatttatttagACACAATCCTACCACAATTTAGTTTGAACAGAGGCATCACCCTAAATATTAGGGAGGTCTTTCACAAAAGCTCAGTAAAGAATATTTTAGGCTAGGCTACATTGTGGTCACTGAAGAAGAGACAGTACACTTTGTACTGGTTACTGTGATAGGTTTGATAAATATGCAAGTCTTTAATTTCTGGGTTTGGACCTGACAAACTGACTTTTAGAATGAATCATTTTCACCTGAAAGCTATTATTTCCAGTTGTTTTTAGATACCTGTACGCAGCAGATAATCCTTAGAAAACTTAAGCTACTAACAAATATTAAGCTACCATAATTATGCTACTACgacccaaaatatatataaggtaTGTTACCTCACTATCCCACCACTGAAAACCTCCCTCAGTACTGTCATCCATTTTCCCTTTTTATAAAGGTTGCATAAATTCCAATCTATTGCTTCAAATTGGATATCTATAAGATTCTCatacatgtatgtattttttttaccattccaATTGCCACACAAATGACACAAAGAAATTGTATTTTGGCCACTTTTACTTGCTGTGTTGACATACACTTTAAGTATTGGGAAATGTGATTTTCTATATGTAGTTTGCTTTTTTTCCAAATGTTCCTTAGAATGTGCATGTATAGATGGCGACTGATGCTATGAAACAGTATCAGttggtaaaagaaaaatataaagtgGTTGTATAATCAGGGGAAACTGACTTCGGAAACTCTTCTGGATTGCTGTATGATGAACTGATGAATTGTTTTGGCCATGTCTTTTAGTAGTATTGTGTTCCCAGTGTTGTATTCATATGTGAGGATTTGAATGACGTTTATATAGAGATTGAGTTACACTTCATTGTTAGATCCATGGTTCAATTATTTAAGACTCCTAGTTTCTACAATTAATCAGGACTGTTCAATATTTACATTAGCACCAGCCTTGAGAATGAATAATCCACGTACTGTAGAGAACATACTGAACATGCTTGAATTCACCTCCTTTTCACTTACATCCAGTGGCCTTAGCTGTGGGGTTTTGCTCTCAGAGACCATGGAAGACTGCAAGCCATTCCTTATTTTCATGGCATGGATTTACTGATTGTTCTTCTGGTCCCTAAACTTCATTTAGCTCAGAGTTTTCTGGAGACTAAACTTTGCAGTGAGCTCTAGCTGTTTGATTGGTTTGTCATCAGATTTCAGTCTTAGCTTTGCCACCTAGTGGTAAATATGGATGCCAGAGAGGCTTGTGATAAGTGTACAGCATTGTATGACCTCCCTGTTTTGGTCTTTTGACGGATAGCTACTGAAATAAGGGTCATCTCACCAATGTTAGTTTAGTCCACATAAAATCCACACAGGAAAATAGGGTGTAGTATTTGATGCATCCTGTTGTATGTTTGTCATTAGGCTGCATGTttagtgattgtgtgtgtttgaaagtgaaaaGTATGACAGTAGGTAACTATTTTTGATGCTTGACCCAAAATGAGAGTTGTATGATACATGATGTAATACTCCACAGACTCATAGATTGTTTGCATACTCCTTATTTTGCTGGACACATCATTGCGTTATAGACATGAAAGTTCAACAACACTCTGCTGTGAGTCCTAGGCCTTGTCCACATGTATCCAGGATATTCTGGGTTTGCGATTTGGACACAAACATTTAATGTGTCATACAATTTTGATAATAATTGCGATAAATATTCTAAATTAGATTAACCTCATCAAAGGTTTTAAGCATTTGCTGCACTCATTTTTCCAGGCCAAGAAGCAGTTTGGTTTGTGCGTTCACAGTGgacctctacctcgctctgcctccatgTAATTCCCCTGTTGCTGCACACAGGTAATGcaatttgagtttgctgttctgtaTGATGCTCATTTAGTTTGATTATCGGAAAACCTCTTCtctttactgaaaaaatacaatttactgTATAGTAAatgagaggggggggggtgtagcAATTTGGActcaaacattgtttttaatcactgaaTACAAGAGTGGAGATAATGGAAAACTTACTGTTTTTAGTGTTACATGGACAAGGAAATCTGAAATATCTTCATTCTCCCTAAATAGACCACCAGTGTCTACATACATATGGCACTAGTTTCAGATTTTGAGATATGTAAATTCTGCccaatttacatatataatgCTATGTTTAGATTTAGAATCTGTCACTTTGTGCCTTGCATGCTGCACGACTTGGGGAGTATTGCATAATTTGGGATTAAACCTCTGCATGGTGTGTTGCTGTCTCTAATTATGAGGTACTACTGCCCAATACAGGGCTACCATGCTCATGCAAAAATTGCTAAATTATGGCCTCCgggtggtccagcggactaaggggctgccactatgatcaggagaacgctggttcaaatcctggtcatgccgCTTGCCATTGGCTGTCAGAGTCGTGcactctgagtgggtagatggtgctctcttgccacatcactccaaaaggtgatgtcgatcagcacaaggtgtctgtgagctgatgtattggaaccaagtcactgcgctttcctccaagctcgCTGTGATTTATACTCTGcaatgctgtatcagcagctcgaaaaaaaggcggtggctgacttcacatgtatcggaagaggcatgtgcaagtcttcaccctcctggtgtaagggcatcactagtgatggaaGTACAGCTGAAAAGTGGAAGTCAGATTATCGGCATAGCTAAAATGGGGAGAAAAgtgggataaaaataaaaactgcaaaatgtaaaacagagaagGAAATTCGGATATCTGGATATGTGTGGACGGGAATCGTATACAGTGTGCTGTTGATAGCTTTACAAGAgcatcattgaaaagtacattATTCACCTATGTTCATCTGTCTGTACTGTGGGAAAGCCCTTTAAGGCAAACGCTGCTTACGCACTCTGGTTCTGTTTTGCTGCTTATCAATTTACTTCAGTAGCACAAGAAGATAAGGTTAATACACATGAACAAACAGTGAAATGCATCTGTATTCATTTCCTAATGCATTGCATTTGGGGaacaaatgtaaagaaaaatattctAAGATCTGATCTGAGGGCTTTAGTGGTTTCCTTGCATCCATTAACACTGTAGAAGACCCAAATGTCTGTGCCTTGCCTGGCAGAGGCTTAAGTATTTTCTTAGGAGAATAAGTGATTTTGGCCTATGCAAGCCTTCGTAAGAGCCCACATTCATCTGTCAGTTTCTAAACTGCCTGTATTGCCTCATGTACATGATTTTGACCTTGAAAatagtatttttcttttttaggtaCCTTTAACTCAAGACAACACGTTGTGGTTTGATACAGGTTTTTTCAAATAAGTATGTTGATTGtactttaatatataattacatttcttGAAATGAATTTTGAATTTTCACTggttctatttttctatttttacctCAGAGAGGTTAAATGAGTGACCAACTTTGTAGCTAGAGAGCATCTTCAAAAATAAAGCTTCAATATCA

Function

NR:

description
PREDICTED: BTB/POZ domain-containing protein 7-like isoform X1

GO: NA

KEGG:

id description
K10479 BTBD7; BTB/POZ domain-containing protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022673097.1 True 8545 mRNA 0.47 12 28010514 28072594

Neighbor

gene id symbol gene type direction distance location
LOC103041699 prima1,LOC108423434,LOC108270468 coding upstream 89341 27906826 ~ 27921173 (+)
LOC103042002 LOC108423517 coding upstream 115531 27881028 ~ 27894983 (+)
ddx24 ddx24 coding upstream 140541 27860194 ~ 27869973 (+)
LOC103042318 LOC103042318,LOC108423523 coding upstream 151773 27855741 ~ 27858741 (+)
LOC103043868 atxn3,LOC108423524,LOC106596382,LOC107575702,LOC107683100 coding upstream 155132 27848677 ~ 27855382 (+)
ttc8 ttc8,LOC106591546 coding downstream 6979 28079573 ~ 28085275 (+)
ndc80 ndc80 coding downstream 21769 28094363 ~ 28101936 (+)
nek9 nek9 coding downstream 31322 28103916 ~ 28113291 (+)
acyp1 acyp1 coding downstream 46427 28119021 ~ 28121707 (+)
LOC103036705 fos,LOC108423428,LOC107702235 coding downstream 54799 28127393 ~ 28130890 (+)
G84001 NA non-coding upstream 87156 27923069 ~ 27923358 (+)
LOC111193235 LOC103459065 non-coding upstream 164548 27831977 ~ 27845966 (+)
G83972 NA non-coding upstream 305633 27704254 ~ 27704881 (+)
LOC107197843 NA non-coding upstream 394947 27604237 ~ 27615567 (+)
G83826 NA non-coding upstream 741283 27268958 ~ 27269231 (+)
G84164 NA non-coding downstream 229139 28301733 ~ 28360989 (+)
LOC111193142 NA non-coding downstream 256181 28328775 ~ 28331408 (+)
G84219 NA non-coding downstream 301354 28373948 ~ 28374517 (+)
G84264 NA non-coding downstream 514802 28587396 ~ 28587954 (+)
G84280 NA non-coding downstream 633299 28705893 ~ 28723051 (+)
LOC103044189 LOC108423527,LOC107677688 other upstream 178930 27824256 ~ 27831584 (+)
fam98b NA other upstream 188303 27815805 ~ 27822211 (+)
fermt2 fermt2 other upstream 1233026 26727823 ~ 26777488 (+)
spata7 NA other upstream 1611247 26392890 ~ 26399267 (+)
LOC103031022 LOC103031022,LOC108423548 other upstream 1683176 26321185 ~ 26327338 (+)
LOC107197841 NA other downstream 897670 28970264 ~ 28970839 (+)
LOC103045392 NA other downstream 926908 28999502 ~ 29025114 (+)
LOC111193240 NA other downstream 968385 29040979 ~ 29041607 (+)
LOC111193135 NA other downstream 970623 29043217 ~ 29043739 (+)
LOC107197844 NA other downstream 999297 29071891 ~ 29078898 (+)

Expression


Co-expression Network