adi1 (adi1,LOC107753353)


Basic Information

Item Value
gene id adi1
gene name adi1,LOC107753353
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 29187575 ~ 29215673 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022673123.1
TTTGACAGGACTTTTATTAGGCAGGATTTTTTGTACACGGTCAGATCACGCTGTTTCAGAGACAGTGCTAAACTGAAGCTCTACTAAAAGCTGGGTGTTTTGGCAGGTTTGTGAATGATGTCTGTAATAGAGGCCTGGTTTATGGACGAGTCCAGTTCGGATCAGCGGCTCCCTCACAGACTGGAGCCGAACCAGCCCGTCAGTCTGCAGGAGCTGCAGAAGATCGGAGTTTTCTACTGGAAGTTAAATGCTGACATCTATGAAAGTGATCCTGAGTTACAAAAGATCCGTGAAGATAGAGGTTACTCGTACATGGACATTATAACCATCCATCCGGATAAGCTGCCAAATTATGAGGATAAACTGAAAATGTTCTATGAGGAACATCTGCACCTGGACGACGAGATCCGCTACATCTTGGAAGGAAGAGCGTACTTTGACGTCAGGGACCAAAATGACCGCTGGATACGAATTGCTATGACCAAGGGAGACCTGATCACACTACCAGCAGGAATTTACCACAGATTCACCCTGGATGAGACAAACTACACTAAAGCCATGAGGCTGTTTGTTGGAGAGCCAGTGTGGAAGGCTTACAACCGCCCAGCTGATGAGTTTGAAATTCGCCAGAAGTACGTGCAGTCACTGAAGTGCCGCTAAGCTGCAAATAATACCTGAAGAGACATGTTCTTAAGATCTATGCCCTATGCAATTCCTCAATAATCCTACACTAATATCAGTATTCATAGTGCCTTTATTTTTAGATGATTAAAGTACACGATCAATTTACAATTATGAAGACTGTCAGGGCAGTGCTATTTGTAGCTTTAGTGACTCTTTAGTAAGacatttgaaactgaaactctgtCATAGTGAGGTGCAAATGAAACTACTGCACACCTGCTtctgtagtgttatagtgtcttaaacttttaatgatcagattttaacaaattgaaataaagtttcagtttctttttt

Function

symbol description
adi1 Predicted to enable acireductone dioxygenase [iron(II)-requiring] activity. Predicted to be involved in L-methionine salvage from methylthioadenosine. Predicted to act upstream of or within methionine biosynthetic process. Predicted to be located in cytoplasm; nucleus; and plasma membrane. Is expressed in several structures, including alar plate midbrain region; head; optic tectum; optic vesicle; and pectoral fin bud. Orthologous to human ADI1 (acireductone dioxygenase 1).

NR:

description
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase

GO:

id name namespace
GO:0019509 L-methionine salvage from methylthioadenosine biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005886 plasma membrane cellular_component
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005506 iron ion binding molecular_function
GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity molecular_function

KEGG:

id description
K08967 mtnD, mtnZ, ADI1; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022673123.1 True 981 mRNA 0.42 4 29187575 29215673

Neighbor

gene id symbol gene type direction distance location
LOC111193134 ltbp2 coding upstream 218547 28854283 ~ 28969028 (+)
arel1 arel1,LOC107573237,LOC107744492,LOC107672354,LOC107704359 coding upstream 386336 28775149 ~ 28801239 (+)
LOC103029222 NA coding upstream 439147 28739241 ~ 28748428 (+)
dlst dlst,LOC107749530,LOC107702243,LOC103357959 coding upstream 511912 28662092 ~ 28675663 (+)
esrrb esrrb,LOC107678144,LOC106611051 coding upstream 627481 28428946 ~ 28560094 (+)
eipr1 tssc1,LOC107753352,LOC107687834,LOC107723283,LOC107589760 coding downstream 49380 29265053 ~ 29324443 (+)
LOC103038403 myt1l coding downstream 198839 29414512 ~ 29625594 (+)
pxdn pxdn,LOC107680176,LOC107687838 coding downstream 410962 29626635 ~ 29716871 (+)
LOC103028385 LOC103028385 coding downstream 518940 29734613 ~ 29737276 (+)
LOC103027650 pdia6,LOC105893145,LOC106607563 coding downstream 542154 29757827 ~ 29766422 (+)
G84415 LOC108423477,LOC108269999,LOC107723284,LOC107589779 non-coding upstream 1637 29179869 ~ 29185938 (+)
G84414 LOC108269999,LOC108423477,LOC107570253,LOC107684238,LOC107753355 non-coding upstream 11588 29172806 ~ 29175987 (+)
G84412 LOC107589761 non-coding upstream 25208 29160394 ~ 29162367 (+)
G84403 NA non-coding upstream 74926 29110612 ~ 29112649 (+)
G84402 NA non-coding upstream 83597 29103731 ~ 29103978 (+)
G84462 NA non-coding downstream 125258 29340931 ~ 29341213 (+)
G84473 NA non-coding downstream 143524 29359197 ~ 29359659 (+)
G84484 NA non-coding downstream 173555 29389228 ~ 29389688 (+)
G84492 NA non-coding downstream 318149 29533822 ~ 29534343 (+)
G84534 NA non-coding downstream 526354 29742027 ~ 29742487 (+)
LOC107197844 NA other upstream 108677 29071891 ~ 29078898 (+)
LOC111193135 NA other upstream 143836 29043217 ~ 29043739 (+)
LOC111193240 NA other upstream 145968 29040979 ~ 29041607 (+)
LOC103045392 NA other upstream 162461 28999502 ~ 29025114 (+)
LOC107197841 NA other upstream 216736 28970264 ~ 28970839 (+)
LOC103025336 rhob,LOC103025336,LOC105888539,LOC105907285,LOC106607565 other downstream 751877 29967550 ~ 30015180 (+)
alg3 alg3,LOC107660011,LOC107730451,LOC107749127,LOC107557882,LOC107692886,LOC107600115 other downstream 1391084 30606757 ~ 30615062 (+)
pnisr pnisr,LOC102782257 other downstream 2239311 31454984 ~ 31469556 (+)
LOC103034273 LOC103034273,LOC108415529 other downstream 2534030 31749703 ~ 31805403 (+)
G85189 NA other downstream 2607913 31823586 ~ 31824388 (+)

Expression


Co-expression Network