trnal-cag_10


Basic Information

Item Value
gene id trnal-cag_10
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 24827674 ~ 24827756 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnal-cag_10
GTCAGgatggccgagcggtctaaggcgctgcgtTCAGGTCGCAGTCTCCTCTGGAggcgtgggttcgaatcccacttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-cag_10 True 83 tRNA 0.61 1 24827674 24827756

Neighbor

gene id symbol gene type direction distance location
LOC103046279 NA coding upstream 1574 24814910 ~ 24826100 (+)
LOC103033951 LOC108428726 coding upstream 13865 24807926 ~ 24813809 (+)
LOC103034484 LOC107576683 coding upstream 22289 24799032 ~ 24805385 (+)
LOC103032669 NA coding upstream 34343 24772806 ~ 24793331 (+)
fuca2 fuca2 coding upstream 56621 24765981 ~ 24771053 (+)
ptk2b LOC108428731,LOC108270138 coding downstream 21820 24849576 ~ 24882752 (+)
gckr gckr coding downstream 153620 24981376 ~ 24997874 (+)
LOC103039108 NA coding downstream 170579 24998335 ~ 25008777 (+)
xkr6 xkr6,xkr6a,LOC108269486,LOC107693112 coding downstream 217957 25045713 ~ 25071105 (+)
enpp4 enpp4 coding downstream 259847 25087603 ~ 25095143 (+)
G83167 NA non-coding upstream 54881 24771882 ~ 24772793 (+)
G83123 NA non-coding upstream 185019 24642392 ~ 24642655 (+)
G83121 NA non-coding upstream 190792 24636606 ~ 24636882 (+)
G83120 lace1,lace1a,LOC108428707,LOC108269919,LOC108239053 non-coding upstream 192476 24630873 ~ 24635198 (+)
G83116 NA non-coding upstream 207737 24619695 ~ 24619937 (+)
G83180 NA non-coding downstream 10774 24838530 ~ 24840128 (+)
G83295 NA non-coding downstream 65487 24893243 ~ 24893639 (+)
G83307 NA non-coding downstream 104163 24931919 ~ 24932539 (+)
G83354 NA non-coding downstream 300204 25127960 ~ 25187909 (+)
G83438 cdc5l,LOC107594083,LOC107552094 non-coding downstream 533971 25361727 ~ 25367281 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other upstream 685442 24139389 ~ 24142232 (+)
G82811 psma3,LOC107729246,LOC107725600 other upstream 853699 23909682 ~ 23973975 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other upstream 949904 23875439 ~ 23877770 (+)
G82609 baz1a other upstream 1596356 23230430 ~ 23231318 (+)
G82488 NA other upstream 2469539 22357644 ~ 22358135 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 68138 24895894 ~ 24924815 (+)
LOC111193228 NA other downstream 106408 24934164 ~ 24936186 (+)
c9h8orf74 NA other downstream 202241 25029997 ~ 25034121 (+)
supt3h supt3h other downstream 333162 25160918 ~ 25329482 (+)
LOC103033015 LOC108423550,LOC108270308 other downstream 1091801 25919557 ~ 25975283 (+)

Expression


Co-expression Network