trnal-uaa_1


Basic Information

Item Value
gene id trnal-uaa_1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 24306611 ~ 24306693 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnal-uaa_1
ACCAGggtggccgagtggttaaggcgttGGACTTAAGATCCAATGGAGATATGCCCGCGTGGGTTCGAACCCCACGCCGGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-uaa_1 True 83 tRNA 0.53 1 24306611 24306693

Neighbor

gene id symbol gene type direction distance location
stx11 stx11 coding upstream 3845 24299171 ~ 24302766 (+)
LOC103045657 LOC103045657,LOC108428691 coding upstream 31503 24271342 ~ 24275108 (+)
rmnd1 rmnd1,LOC107586664,LOC107692687 coding upstream 36745 24264445 ~ 24269866 (+)
syne1 syne1 coding upstream 49361 24167119 ~ 24257250 (+)
ahi1 ahi1 coding upstream 181496 24113136 ~ 24125115 (+)
trnal-uaa_2 NA coding downstream 658 24307351 ~ 24307433 (+)
trnal-uaa_3 NA coding downstream 2115 24308808 ~ 24308890 (+)
trnal-uaa_4 NA coding downstream 3720 24310413 ~ 24310495 (+)
LOC103045057 LOC108428617 coding downstream 10617 24317310 ~ 24336229 (+)
LOC103047809 grm1,LOC108428695,LOC107733655,LOC107692633 coding downstream 77185 24383878 ~ 24403591 (+)
G82838 NA non-coding upstream 167707 24136576 ~ 24138904 (+)
G82816 NA non-coding upstream 391152 23913129 ~ 23915459 (+)
G82814 NA non-coding upstream 398003 23908338 ~ 23908608 (+)
G82813 NA non-coding upstream 401216 23904860 ~ 23905395 (+)
G82785 kiaa0586 non-coding upstream 534494 23769525 ~ 23772117 (+)
G83064 NA non-coding downstream 8022 24314715 ~ 24314965 (+)
G83071 NA non-coding downstream 42748 24349441 ~ 24350535 (+)
LOC111193226 NA non-coding downstream 50282 24356975 ~ 24367973 (+)
LOC111193227 NA non-coding downstream 265635 24572328 ~ 24576551 (+)
G83116 NA non-coding downstream 313002 24619695 ~ 24619937 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other upstream 164379 24139389 ~ 24142232 (+)
G82811 psma3,LOC107729246,LOC107725600 other upstream 332636 23909682 ~ 23973975 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other upstream 428841 23875439 ~ 23877770 (+)
G82609 baz1a other upstream 1075293 23230430 ~ 23231318 (+)
G82488 NA other upstream 1948476 22357644 ~ 22358135 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 589201 24895894 ~ 24924815 (+)
LOC111193228 NA other downstream 627471 24934164 ~ 24936186 (+)
c9h8orf74 NA other downstream 723304 25029997 ~ 25034121 (+)
supt3h supt3h other downstream 854225 25160918 ~ 25329482 (+)
LOC103033015 LOC108423550,LOC108270308 other downstream 1612864 25919557 ~ 25975283 (+)

Expression


Co-expression Network