G213891


Basic Information

Item Value
gene id G213891
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 5173069 ~ 5174096 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU290305
AGAATGACAAAgaaagcagaaaaacagagggagagaaatctGGAAGACAAGTGATAAAAGCTAAAAGAGAAATGATAGAGTCAGTAGAGTGATAAAGCAAGAGTCAAAAAGAAACGGAAAAAAGtaagaacaagagaaagagggCGAGCAATGGAGAGAGAAATCTGAAAGATGAGTGATAAGAGGGAAAGGAGAGAAAATAAaggggcaggagagagagagcgagggagcgcGAGAGCAGGTAGCCAGGCAACAGCGgctgtaatgttgagcagatgGTGCTCATAGGAGCCATGATGGACGACAGCGGGCGGCAGCctctaacaacacacacagacccaggggagggagggagagagagagaaagagagaggggaagggGGGAGacggtaaaagagagagagaggagcgtaAATAAAGTGGCATGCCTCTTATTCCTCCCTCTGCCTCTTTCTATCCTCATCCCTCGTGTTTCCTCTGCACGCACTGTccaccttcctcctcctcctcctctctctttctctcctctctctttctctttgttttcaCTTGCTCCACCTGGTCCGACCACAACACATGACAACATACACCCACATAACCTACACTAAATGacactctcgcgctctctctttccctccctcttacagacaaacacatgcacacagtacTCTGTGTATTTAAGCTACTCCAACATATGGCTAAAGTCCTTAGCATTGATTGTATAATCTGTATCGGAACAATTAACACAATTAACACAGTAATCAGTTCTATTAGCTCTGCAGTCATTTCGTATTCCTGCTAAACTACAGATACAGATGTTTGTGAACACCTCTTATACTGAATACTTCTTTATTTACTTCAAGGTGTACCCACTGATGACACAGATCCACATCCACACATACAGCTTATCTACTCACAGTAGATAAAGTATTATTTCCAAAAGAATAGGACCATCTAGAGAAGATGAGCATGAATTTACTGGCACCAAACTGTCACAGCAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290305 True 1003 TUCP 0.44 2 5173069 5174096

Neighbor

gene id symbol gene type direction distance location
LOC103040975 zgc:56493,LOC103040975,LOC108444223,LOC107674259,LOC107737089,LOC108263754,LOC107671288,LOC107559635,LOC107551115 coding upstream 114370 5051210 ~ 5058699 (+)
LOC103046693 NA coding upstream 125347 5035113 ~ 5047722 (+)
LOC103040673 faah2a,LOC108434801,LOC108263609,LOC107712025 coding upstream 144286 5015309 ~ 5028783 (+)
LOC103040043 NA coding upstream 194466 4967964 ~ 4978603 (+)
fam13a fam13a coding upstream 308258 4737253 ~ 4864811 (+)
LOC103035563 LOC108263533,LOC108434806,LOC107712022,LOC107737080,LOC107671368 coding downstream 199182 5373278 ~ 5396120 (+)
LOC103034165 LOC108434807 coding downstream 227246 5401342 ~ 5409502 (+)
LOC103044852 LOC108434764,LOC107671567 coding downstream 241113 5415209 ~ 5427765 (+)
LOC111195958 NA coding downstream 285661 5459757 ~ 5460504 (+)
lrpap1 lrpap1,LOC107749950,LOC107714242,LOC107551171,LOC107674255,LOC107556528 coding downstream 515610 5689706 ~ 5703849 (+)
G213899 NA non-coding upstream 14997 5155318 ~ 5158072 (+)
G213892 NA non-coding upstream 51412 5076486 ~ 5121657 (+)
G213780 NA non-coding upstream 123942 5048048 ~ 5049127 (+)
G213776 NA non-coding upstream 140136 5029008 ~ 5032933 (+)
G213748 NA non-coding upstream 295196 4872039 ~ 4877873 (+)
G213915 NA non-coding downstream 141318 5315414 ~ 5315866 (+)
G213957 clgn,LOC107674239,LOC107737082,LOC107556507,LOC107712024,LOC107671330 non-coding downstream 191793 5365889 ~ 5371134 (+)
G213962 NA non-coding downstream 275290 5449386 ~ 5490339 (+)
LOC111195957 NA non-coding downstream 283629 5457725 ~ 5459394 (+)
G214002 NA non-coding downstream 324827 5498923 ~ 5499461 (+)
tbc1d9 tbc1d9,LOC107598515,LOC107594295 other upstream 582617 4510939 ~ 4590452 (+)
G213715 znf330 other upstream 744107 4398585 ~ 4428962 (+)
inpp4b inpp4b,LOC107657998 other upstream 805924 3900242 ~ 4367145 (+)
G213555 NA other upstream 1484077 3688569 ~ 3688992 (+)
LOC103044168 NA other upstream 1814875 3293928 ~ 3358194 (+)
LOC103034491 scoc,LOC103034491,LOC108434805,LOC107674238,LOC108263532,LOC103132857,LOC103463814,LOC106946201 other downstream 175071 5349167 ~ 5359732 (+)
G214006 NA other downstream 347088 5521184 ~ 5521675 (+)
G214175 NA other downstream 1109685 6283781 ~ 6284368 (+)
LOC111196031 NA other downstream 1224980 6399076 ~ 6409068 (+)
pold4 NA other downstream 2636882 7810978 ~ 7813036 (+)

Expression


Co-expression Network