G214304


Basic Information

Item Value
gene id G214304
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 6756405 ~ 6756758 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU290862
gttcttcttattcttcttattattattattattattattattctacgcTAAAATTTCTCAACGCTACTCCTCCTACAGTTTTCGAGCTAGAACCACCAAACTTCACAGGATGGTAGAACCCATAGCCACTTAAGTTGCTTGTGCTTTTCTAAGCGATCGGAGAACCAGGGTTCTAGCACGGTTCCGTCAAAGTCACTTTTTTCCCCATAGACTTCCATTCAcacttttttcaaactgctgtaAAAGTCACAATTTTCAAGCTAGAACCACGAAATTCACAAGACATACAGAACTTGCAGAGACGTTTCAGACGATATGCTGATCTCACCGACACGATTTACGGTTTTCGTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290862 True 354 lncRNA 0.39 1 6756405 6756758

Neighbor

gene id symbol gene type direction distance location
lef1 lef1 coding upstream 27422 6648941 ~ 6728983 (+)
trnam-cau_43 NA coding upstream 274776 6481558 ~ 6481629 (+)
LOC103036066 NA coding upstream 298084 6454447 ~ 6458321 (+)
LOC103035747 NA coding upstream 308239 6435721 ~ 6448166 (+)
LOC103042697 NA coding upstream 323277 6428242 ~ 6433128 (+)
gstcd gstcd,LOC107757010,LOC107729368 coding downstream 28832 6785590 ~ 6993387 (+)
npnt npnt,LOC107729354,LOC107675850 coding downstream 255761 7012519 ~ 7142268 (+)
aimp1 aimp1,LOC107594432,LOC107757008,LOC107729369 coding downstream 516447 7273205 ~ 7301823 (+)
pkd2 pkd2,LOC107684281,LOC107583176,LOC107706826 coding downstream 709419 7466177 ~ 7481674 (+)
LOC103045679 NA coding downstream 772822 7529580 ~ 7549205 (+)
G214294 NA non-coding upstream 57987 6665211 ~ 6698418 (+)
G214290 NA non-coding upstream 124031 6632065 ~ 6632374 (+)
G214283 NA non-coding upstream 174672 6581294 ~ 6581733 (+)
G214215 NA non-coding upstream 282661 6380944 ~ 6473744 (+)
G214227 NA non-coding upstream 286205 6469473 ~ 6470200 (+)
G214313 NA non-coding downstream 214 6756972 ~ 6759193 (+)
G214340 NA non-coding downstream 111959 6868717 ~ 6869146 (+)
LOC111195949 NA non-coding downstream 177197 6933955 ~ 6939059 (+)
G214362 NA non-coding downstream 253114 7009872 ~ 7010111 (+)
G214365 NA non-coding downstream 311189 7067947 ~ 7072835 (+)
LOC111196031 NA other upstream 347337 6399076 ~ 6409068 (+)
G214175 NA other upstream 472037 6283781 ~ 6284368 (+)
G214006 NA other upstream 1234730 5521184 ~ 5521675 (+)
LOC103034491 scoc,LOC103034491,LOC108434805,LOC107674238,LOC108263532,LOC103132857,LOC103463814,LOC106946201 other upstream 1396673 5349167 ~ 5359732 (+)
G213891 NA other upstream 1582309 5173069 ~ 5174096 (+)
pold4 NA other downstream 1054220 7810978 ~ 7813036 (+)
LOC103021346 LOC108412479 other downstream 1099404 7856162 ~ 7877118 (+)
G214773 NA other downstream 1354190 8110948 ~ 8111325 (+)
LOC103041196 LOC108443732,LOC107582026,LOC107601840 other downstream 2201541 8958299 ~ 9030598 (+)
sprn sprn other downstream 3818737 10575495 ~ 10583088 (+)

Expression


Co-expression Network