G214502


Basic Information

Item Value
gene id G214502
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 7610083 ~ 7651178 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU291123
CTGCAGCTTGGTCCCTCCTTCTTCCCTCACTCTGGCACAGTCTAACATGTGCTCTGCCTGAGgtatGTGTGAATGAGACTCACAGGGTTAGGGGGCATGGCAGGTTGCCCACCGTACTGTGGCTGCACTGGATATGCAGGGTTAGGAGGAGGATGGACTTGACTCTCACCTGGAGCAGGATAGCCAGGAGTGTACATCtagaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU291123 True 206 lncRNA 0.54 2 7610083 7651178

Neighbor

gene id symbol gene type direction distance location
LOC103045994 NA coding upstream 25924 7551920 ~ 7584159 (+)
LOC103045679 NA coding upstream 60878 7529580 ~ 7549205 (+)
pkd2 pkd2,LOC107684281,LOC107583176,LOC107706826 coding upstream 128409 7466177 ~ 7481674 (+)
aimp1 aimp1,LOC107594432,LOC107757008,LOC107729369 coding upstream 308260 7273205 ~ 7301823 (+)
npnt npnt,LOC107729354,LOC107675850 coding upstream 467815 7012519 ~ 7142268 (+)
LOC103023957 tcirg1a,LOC108434797,LOC105908477,LOC106609897,LOC107679885 coding downstream 30860 7682038 ~ 7699304 (+)
LOC107197796 NA coding downstream 83497 7734675 ~ 7742087 (+)
LOC103022802 NA coding downstream 97791 7748969 ~ 7757553 (+)
LOC103021660 si:dkey-28b4.8,LOC108434786,LOC107664566,LOC107551445,LOC108262771,LOC107556825 coding downstream 164645 7815823 ~ 7840389 (+)
tmx2 tmx2,LOC108412483,LOC105022872,LOC107664575 coding downstream 232016 7883194 ~ 7892498 (+)
G214465 NA non-coding upstream 187438 7420644 ~ 7422645 (+)
G214365 NA non-coding upstream 537248 7067947 ~ 7072835 (+)
G214362 NA non-coding upstream 599972 7009872 ~ 7010111 (+)
LOC111195949 NA non-coding upstream 671024 6933955 ~ 6939059 (+)
G214340 NA non-coding upstream 740937 6868717 ~ 6869146 (+)
G214533 LOC108434796 non-coding downstream 51468 7702646 ~ 7705942 (+)
G214614 NA non-coding downstream 92022 7743200 ~ 7743407 (+)
G214613 NA non-coding downstream 93194 7744372 ~ 7745072 (+)
G214618 NA non-coding downstream 109357 7760535 ~ 7760783 (+)
LOC111196001 NA non-coding downstream 124458 7775636 ~ 7776179 (+)
LOC111196031 NA other upstream 1201015 6399076 ~ 6409068 (+)
G214175 NA other upstream 1325715 6283781 ~ 6284368 (+)
G214006 NA other upstream 2088408 5521184 ~ 5521675 (+)
LOC103034491 scoc,LOC103034491,LOC108434805,LOC107674238,LOC108263532,LOC103132857,LOC103463814,LOC106946201 other upstream 2250351 5349167 ~ 5359732 (+)
G213891 NA other upstream 2435987 5173069 ~ 5174096 (+)
pold4 NA other downstream 159800 7810978 ~ 7813036 (+)
LOC103021346 LOC108412479 other downstream 204984 7856162 ~ 7877118 (+)
G214773 NA other downstream 459770 8110948 ~ 8111325 (+)
LOC103041196 LOC108443732,LOC107582026,LOC107601840 other downstream 1307121 8958299 ~ 9030598 (+)
sprn sprn other downstream 2924317 10575495 ~ 10583088 (+)

Expression


Co-expression Network