G214614


Basic Information

Item Value
gene id G214614
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 7743200 ~ 7743407 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU291281
taagttcttctgtgtatgaaataaaataaccccactaaccggataatacagctctctacagttcatctttcagcccaagcagctaacagcagcagtttagagcagccgtcacggagtcactgctcggattacattataaacaggtcagttagcgcgctgctaacctcaggatgtttataactacggagtttagtggacacaccacggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU291281 True 208 lncRNA 0.45 1 7743200 7743407

Neighbor

gene id symbol gene type direction distance location
LOC107197796 NA coding upstream 1113 7734675 ~ 7742087 (+)
LOC103023957 tcirg1a,LOC108434797,LOC105908477,LOC106609897,LOC107679885 coding upstream 43896 7682038 ~ 7699304 (+)
LOC103045994 NA coding upstream 159041 7551920 ~ 7584159 (+)
LOC103045679 NA coding upstream 193995 7529580 ~ 7549205 (+)
pkd2 pkd2,LOC107684281,LOC107583176,LOC107706826 coding upstream 261526 7466177 ~ 7481674 (+)
LOC103022802 NA coding downstream 5562 7748969 ~ 7757553 (+)
LOC103021660 si:dkey-28b4.8,LOC108434786,LOC107664566,LOC107551445,LOC108262771,LOC107556825 coding downstream 72416 7815823 ~ 7840389 (+)
tmx2 tmx2,LOC108412483,LOC105022872,LOC107664575 coding downstream 139787 7883194 ~ 7892498 (+)
LOC103028482 LOC108434761,LOC105891496,LOC106611657,LOC101069382,LOC108243062,LOC106594846,LOC106604652 coding downstream 277242 8020649 ~ 8029171 (+)
slc43a3 slc43a3 coding downstream 371672 8115079 ~ 8127288 (+)
G214533 LOC108434796 non-coding upstream 37258 7702646 ~ 7705942 (+)
G214502 NA non-coding upstream 92022 7610083 ~ 7651178 (+)
G214493 NA non-coding upstream 95203 7573165 ~ 7647997 (+)
G214465 NA non-coding upstream 320555 7420644 ~ 7422645 (+)
G214365 NA non-coding upstream 670365 7067947 ~ 7072835 (+)
G214613 NA non-coding downstream 965 7744372 ~ 7745072 (+)
G214618 NA non-coding downstream 17128 7760535 ~ 7760783 (+)
LOC111196001 NA non-coding downstream 32229 7775636 ~ 7776179 (+)
G214638 ssrp1,ssrp1b,LOC107746478 non-coding downstream 53007 7796414 ~ 7800876 (+)
LOC111195953 NA non-coding downstream 97521 7840928 ~ 7845966 (+)
LOC111196031 NA other upstream 1334132 6399076 ~ 6409068 (+)
G214175 NA other upstream 1458832 6283781 ~ 6284368 (+)
G214006 NA other upstream 2221525 5521184 ~ 5521675 (+)
LOC103034491 scoc,LOC103034491,LOC108434805,LOC107674238,LOC108263532,LOC103132857,LOC103463814,LOC106946201 other upstream 2383468 5349167 ~ 5359732 (+)
G213891 NA other upstream 2569104 5173069 ~ 5174096 (+)
pold4 NA other downstream 67571 7810978 ~ 7813036 (+)
LOC103021346 LOC108412479 other downstream 112755 7856162 ~ 7877118 (+)
G214773 NA other downstream 367541 8110948 ~ 8111325 (+)
LOC103041196 LOC108443732,LOC107582026,LOC107601840 other downstream 1214892 8958299 ~ 9030598 (+)
sprn sprn other downstream 2832088 10575495 ~ 10583088 (+)

Expression


Co-expression Network