G214618


Basic Information

Item Value
gene id G214618
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 7760535 ~ 7760783 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU291286
ATACACTGCTTTTCTCAGATGTTATATCCAGACGAGTGAAAAAATACGCTGGCTCACACTCGTCCTCTGATTTATCCAGATCACAAACCCAGGATATCTTTATGCCGATCACCCCGCCCTAAAAACAGAGAGACTGAGAGTCAATGTACTGTAAAACAAGATTTAGTGAAATGCTCATTTTATAGGGGTTTGATAAactatatattgtattgtgtttgtgttttgtatcaTCATTTAgtattgtgttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU291286 True 249 lncRNA 0.36 1 7760535 7760783

Neighbor

gene id symbol gene type direction distance location
LOC103022802 NA coding upstream 2982 7748969 ~ 7757553 (+)
LOC107197796 NA coding upstream 18448 7734675 ~ 7742087 (+)
LOC103023957 tcirg1a,LOC108434797,LOC105908477,LOC106609897,LOC107679885 coding upstream 61231 7682038 ~ 7699304 (+)
LOC103045994 NA coding upstream 176376 7551920 ~ 7584159 (+)
LOC103045679 NA coding upstream 211330 7529580 ~ 7549205 (+)
LOC103021660 si:dkey-28b4.8,LOC108434786,LOC107664566,LOC107551445,LOC108262771,LOC107556825 coding downstream 55040 7815823 ~ 7840389 (+)
tmx2 tmx2,LOC108412483,LOC105022872,LOC107664575 coding downstream 122411 7883194 ~ 7892498 (+)
LOC103028482 LOC108434761,LOC105891496,LOC106611657,LOC101069382,LOC108243062,LOC106594846,LOC106604652 coding downstream 259866 8020649 ~ 8029171 (+)
slc43a3 slc43a3 coding downstream 354296 8115079 ~ 8127288 (+)
LOC103029427 LOC108434779 coding downstream 422632 8183415 ~ 8206107 (+)
G214613 NA non-coding upstream 15463 7744372 ~ 7745072 (+)
G214614 NA non-coding upstream 17128 7743200 ~ 7743407 (+)
G214533 LOC108434796 non-coding upstream 54593 7702646 ~ 7705942 (+)
G214502 NA non-coding upstream 109357 7610083 ~ 7651178 (+)
G214493 NA non-coding upstream 112538 7573165 ~ 7647997 (+)
LOC111196001 NA non-coding downstream 14853 7775636 ~ 7776179 (+)
G214638 ssrp1,ssrp1b,LOC107746478 non-coding downstream 35631 7796414 ~ 7800876 (+)
LOC111195953 NA non-coding downstream 80145 7840928 ~ 7845966 (+)
G214670 NA non-coding downstream 88914 7849697 ~ 7850433 (+)
G214684 NA non-coding downstream 138719 7899502 ~ 7926504 (+)
LOC111196031 NA other upstream 1351467 6399076 ~ 6409068 (+)
G214175 NA other upstream 1476167 6283781 ~ 6284368 (+)
G214006 NA other upstream 2238860 5521184 ~ 5521675 (+)
LOC103034491 scoc,LOC103034491,LOC108434805,LOC107674238,LOC108263532,LOC103132857,LOC103463814,LOC106946201 other upstream 2400803 5349167 ~ 5359732 (+)
G213891 NA other upstream 2586439 5173069 ~ 5174096 (+)
pold4 NA other downstream 50195 7810978 ~ 7813036 (+)
LOC103021346 LOC108412479 other downstream 95379 7856162 ~ 7877118 (+)
G214773 NA other downstream 350165 8110948 ~ 8111325 (+)
LOC103041196 LOC108443732,LOC107582026,LOC107601840 other downstream 1197516 8958299 ~ 9030598 (+)
sprn sprn other downstream 2814712 10575495 ~ 10583088 (+)

Expression


Co-expression Network