G215102


Basic Information

Item Value
gene id G215102
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 9481315 ~ 9481538 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU291955
CAGAAACATTGTATCTACAAGATGCTATGGTGGTACTGCTGCAAACAGCACAGCTTCACATTTGTGCTGGGAAAAAGCGTTTTTTCTACAAATAACCCTGCTATTTGCCTGTAGTGGGTTAAAACTGGCTACATtgtgtgagaaaaaaagaaaattaaggtCTATCCAATAGGGAATCGAACTGGAGGAGATTGTTATTGGTCTGTAATCAAATTTGAGCTTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU291955 True 224 lncRNA 0.39 1 9481315 9481538

Neighbor

gene id symbol gene type direction distance location
vps26a vps26a,LOC107666532 coding upstream 770 9469084 ~ 9480545 (+)
srgn srgn coding upstream 15209 9461330 ~ 9466106 (+)
kif1bp kif1bp,LOC107743600 coding upstream 40401 9432604 ~ 9440914 (+)
LOC103044072 LOC108443735,LOC108263510 coding upstream 187673 9263639 ~ 9293642 (+)
LOC103042822 si:ch211-120p12.3,LOC108434955,LOC108263591,LOC103372805,LOC107375814,LOC107676554,LOC107666507,LOC107552954 coding upstream 540770 8920468 ~ 8940545 (+)
supv3l1 supv3l1,LOC107725491,LOC106612443,LOC107601833,LOC107666535 coding downstream 2060 9483598 ~ 9494529 (+)
LOC103047009 hkdc1,LOC103047009,LOC106612435,LOC107676583 coding downstream 15296 9496834 ~ 9515939 (+)
hk1 hk1,LOC107676584 coding downstream 43281 9524819 ~ 9542971 (+)
tspan15 NA coding downstream 84410 9565948 ~ 9614642 (+)
cfap43 NA coding downstream 150853 9632391 ~ 9653852 (+)
G215094 NA non-coding upstream 12916 9466620 ~ 9468399 (+)
G215039 NA non-coding upstream 171142 9288076 ~ 9310173 (+)
G215011 NA non-coding upstream 411448 9068995 ~ 9069867 (+)
G214990 NA non-coding upstream 495200 8981914 ~ 8986115 (+)
G214988 NA non-coding upstream 500907 8979328 ~ 8980408 (+)
G215103 NA non-coding downstream 134 9481672 ~ 9482581 (+)
G215197 NA non-coding downstream 213379 9694917 ~ 9695273 (+)
G215199 NA non-coding downstream 278750 9760288 ~ 9762248 (+)
G215215 fam35a non-coding downstream 305614 9787152 ~ 9788616 (+)
G215224 LOC107601818 non-coding downstream 337726 9819264 ~ 9890322 (+)
LOC103041196 LOC108443732,LOC107582026,LOC107601840 other upstream 450717 8958299 ~ 9030598 (+)
G214773 NA other upstream 1369990 8110948 ~ 8111325 (+)
LOC103021346 LOC108412479 other upstream 1604197 7856162 ~ 7877118 (+)
pold4 NA other upstream 1668279 7810978 ~ 7813036 (+)
LOC111196031 NA other upstream 3072247 6399076 ~ 6409068 (+)
sprn sprn other downstream 1093957 10575495 ~ 10583088 (+)
G215513 polr1b other downstream 1465541 10947079 ~ 10948287 (+)
cpeb3 cpeb3,LOC106604870 other downstream 1644162 11125700 ~ 11195423 (+)
LOC111195936 NA other downstream 2128780 11610318 ~ 11613123 (+)
G215834 NA other downstream 2723963 12205501 ~ 12206164 (+)

Expression


Co-expression Network