G216143


Basic Information

Item Value
gene id G216143
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 13479744 ~ 13480026 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU293347
ttttaatactgccggcgtactgtcaggaagctacctgacagtttttaatagtgccggcaaactgtcaggaagctacctgacagtttttaatagtgcctgcgtactgtcagcaagctccctgacagtttttaatagtgccggcgtactgtcagcaagctccctgacagtttttagtactgCCGGGTATGTGCCTGACACTGCCGGGTCGATGAAAAAGTGGCTGGCGGGTGACGTCACGCAGACCCACCACTGCCGCCCGTCTCCCGTCAAGCAGAGATCCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU293347 True 283 lncRNA 0.53 1 13479744 13480026

Neighbor

gene id symbol gene type direction distance location
pdcd2 pdcd2 coding upstream 14770 13462329 ~ 13464974 (+)
LOC103032026 ccsap coding upstream 70293 13403608 ~ 13409451 (+)
LOC103031709 acta1,act2,LOC108430668,LOC102689871 coding upstream 78105 13397781 ~ 13401639 (+)
abcb10 abcb10,LOC102798660 coding upstream 86707 13381873 ~ 13393037 (+)
trnat-ugu_90 NA coding upstream 132111 13347561 ~ 13347633 (+)
LOC103035225 rab1a,LOC103035225,LOC107601860,LOC107676578,LOC107666439,LOC105005759,LOC107725478 coding downstream 5494 13485520 ~ 13494058 (+)
sertad2 sertad2 coding downstream 61923 13541949 ~ 13594514 (+)
lgalsl lgalsl,LOC107601863,LOC107676594,LOC107666541,LOC107552938 coding downstream 128263 13608289 ~ 13613437 (+)
echs1 echs1,LOC107743519,LOC107676592,LOC107601864,LOC107666378 coding downstream 152172 13632198 ~ 13636389 (+)
fuom fuom coding downstream 159994 13640020 ~ 13645008 (+)
G216141 NA non-coding upstream 4408 13475136 ~ 13475336 (+)
G216139 NA non-coding upstream 5631 13473379 ~ 13474113 (+)
G216138 tbp,LOC107676577,LOC107725488,LOC107666436 non-coding upstream 8329 13465710 ~ 13471415 (+)
G216100 NA non-coding upstream 177697 13301385 ~ 13302047 (+)
G216073 LOC108263287,LOC108263288 non-coding upstream 241891 13205309 ~ 13237853 (+)
G216153 NA non-coding downstream 28836 13508862 ~ 13510402 (+)
G216165 NA non-coding downstream 51150 13531176 ~ 13531577 (+)
G216175 NA non-coding downstream 82461 13562487 ~ 13562709 (+)
G216278 NA non-coding downstream 235977 13716003 ~ 13716515 (+)
G216284 NA non-coding downstream 259523 13739549 ~ 13739809 (+)
trnay-gua_11 NA other upstream 163582 13316075 ~ 13316162 (+)
trnay-gua_10 NA other upstream 164544 13315112 ~ 13315200 (+)
LOC103038358 NA other upstream 167257 13308037 ~ 13312487 (+)
G216053 nin other upstream 375702 13091746 ~ 13104042 (+)
G215886 NA other upstream 763839 12710638 ~ 12715905 (+)
spef1 spef1 other downstream 260487 13740513 ~ 13750306 (+)
gsto1 gsto1 other downstream 862206 14342232 ~ 14347333 (+)
bcl11a bcl11a,bcl11aa,LOC107666449,LOC107601892,LOC107743494,LOC107655449,LOC107559339 other downstream 1242374 14722400 ~ 14780313 (+)
borcs7 borcs7 other downstream 3524515 17004541 ~ 17007537 (+)
LOC111195981 tacc2 other downstream 3669316 17149342 ~ 17184251 (+)

Expression


Co-expression Network