G216165


Basic Information

Item Value
gene id G216165
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 13531176 ~ 13531577 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU293372
caaaggacaataagtggcaaacaagcttctgaaaagtaagtaatgtttattacctgtgattaccacggttgtgtgcatattattaaaagttctgcttcacaaaacgccttgtttgccacgtattgtcctttgtacacatagtgaagtccgagacgttactgaagacgcagcttagctgcgcttttcaatttgcactgcgttgggctttctcagcCACCGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU293372 True 221 lncRNA 0.42 2 13531176 13531577

Neighbor

gene id symbol gene type direction distance location
LOC103035225 rab1a,LOC103035225,LOC107601860,LOC107676578,LOC107666439,LOC105005759,LOC107725478 coding upstream 37118 13485520 ~ 13494058 (+)
pdcd2 pdcd2 coding upstream 66202 13462329 ~ 13464974 (+)
LOC103032026 ccsap coding upstream 121725 13403608 ~ 13409451 (+)
LOC103031709 acta1,act2,LOC108430668,LOC102689871 coding upstream 129537 13397781 ~ 13401639 (+)
abcb10 abcb10,LOC102798660 coding upstream 138139 13381873 ~ 13393037 (+)
sertad2 sertad2 coding downstream 10372 13541949 ~ 13594514 (+)
lgalsl lgalsl,LOC107601863,LOC107676594,LOC107666541,LOC107552938 coding downstream 76712 13608289 ~ 13613437 (+)
echs1 echs1,LOC107743519,LOC107676592,LOC107601864,LOC107666378 coding downstream 100621 13632198 ~ 13636389 (+)
fuom fuom coding downstream 108443 13640020 ~ 13645008 (+)
LOC103037925 LOC103037925,LOC108426815 coding downstream 180596 13712173 ~ 13715354 (+)
G216153 NA non-coding upstream 20774 13508862 ~ 13510402 (+)
G216143 NA non-coding upstream 51150 13479744 ~ 13480026 (+)
G216141 NA non-coding upstream 55840 13475136 ~ 13475336 (+)
G216139 NA non-coding upstream 57063 13473379 ~ 13474113 (+)
G216138 tbp,LOC107676577,LOC107725488,LOC107666436 non-coding upstream 59761 13465710 ~ 13471415 (+)
G216175 NA non-coding downstream 30910 13562487 ~ 13562709 (+)
G216278 NA non-coding downstream 184426 13716003 ~ 13716515 (+)
G216284 NA non-coding downstream 207972 13739549 ~ 13739809 (+)
G216303 erlin1,LOC108263345,LOC108426813,LOC103476975,LOC103134047,LOC106944811 non-coding downstream 234960 13766537 ~ 13769434 (+)
LOC111195921 NA non-coding downstream 243529 13775106 ~ 13776806 (+)
LOC103033819 LOC108426824,LOC108263419,LOC107725444 other upstream 46805 13479176 ~ 13484371 (+)
trnay-gua_11 NA other upstream 215014 13316075 ~ 13316162 (+)
trnay-gua_10 NA other upstream 215976 13315112 ~ 13315200 (+)
LOC103038358 NA other upstream 218689 13308037 ~ 13312487 (+)
G216053 nin other upstream 427134 13091746 ~ 13104042 (+)
spef1 spef1 other downstream 208936 13740513 ~ 13750306 (+)
gsto1 gsto1 other downstream 810655 14342232 ~ 14347333 (+)
bcl11a bcl11a,bcl11aa,LOC107666449,LOC107601892,LOC107743494,LOC107655449,LOC107559339 other downstream 1190823 14722400 ~ 14780313 (+)
borcs7 borcs7 other downstream 3472964 17004541 ~ 17007537 (+)
LOC111195981 tacc2 other downstream 3617765 17149342 ~ 17184251 (+)

Expression


Co-expression Network