G218240


Basic Information

Item Value
gene id G218240
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 21851372 ~ 21855141 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU296124
tgcCATATGCTATATATATTATCCCTCCTTTATGATACCACTGTAAACAATTTACAGGAGACAAGGTAGACAAGGAAGAGTGCACATATATTTAGGTGTTCAATACTAAAACAAGGTAAATGAATTTGTTCTTTGTTAAAACCTGGTCTTCTGGACTATCTAaccctgttttgttttgttatggtGTTATATAGGTGTTATAGCTGGCCCCTAGCTATATTAGCTATAGCCATACATCTAGTTCTGCACTCAATATAAAtgcattggaaaaaaaaaaaatcaatcaaatgtCTATCAGATTCTGAAGCCACAAATCAAGTTCCCGCTAAATGACAGTTAAAGTTCATTTCCCCTCATTCTCTTCTGCAGAGGAATCTATATGCCTTAAATCTGTTTCATCACTTTCTACAATTTGTTTATCTGACTCTGAACTCTCAAAAAATCTCATTTTCTCAGTGTGTACCGTGTCTCTCAACTTGCGTATGGAGGAGGCTGTGTCACCAGAGACAGCATCTGAGTCTTCCTCAAAaacctgtgttttctttgtGACAATTACTTCCTCCTTATTTTCACCAAATACCTCTGTTACTATATACCTCTCCACTAAAGTGTGTTGTTCTTTTAGCACTCTAGTCTTATCAACTGCCATTAATGAGGCTGATTGTACTGCTACTTTCTGTAGAGCCAAGGTTTCAGTATCTTTTGAATCTACACTGCTGAAGATTGCAGCGTGCTGTGTGTCTGGTACAGTTTGTACATTTGACACAATTCTGTGAATTTCTCCTGACATCTCTCTGAGAGTATCCACTGAAGAAGAAGACATATCAGAAGAGCCTGGAATATTCACTTTCTCTGGCTGATGAGGCTCCATGGAAATTAGTTCAGTCCTGGCTGTTGAAGTAATAACATCACTATGTAAGTCACTGAGCTCAACAGTTGCAGTAGATTCAGAATATTTCACTTTGACTTTTGTAGGAGAAGCCAGAGAAAGGCAAACATGTTCAGTTGTTAGTGCAGAACTTACATCAGCAAAAGCATCAGATGATCTCATGGACAATGTTGGGCTGACACTGTCCTCTTCAATATCTCTAGATGAACTCTGTCCGGGCTCTTTCTCCTTACTGTCACTCACTGGACTCTCATCGGTTTTCTGAGGTGGTTGAGAAGCTTCTTTTTCAGTAGCTTTTGCAGTTTTGGTTGGTGACGAAAACTTTGGAAACCTAAACCATCCACTCTTGTCAGCTTTCATTTGTTTGTCATCTGCTACTGATTTATCATCTGTCTGAGTCACCATttgcttttcattattttcaacACTGGCTTCTGGATCCGTCTTCCTATCACCTTCATCTGAAGGCAGATTGATTCCTAGCTTGGGAAGTTTAAATGTAAGTGTAGTTTTTTCCTGAGCTCCATCTTCCTTATATTTGGCTGTAGCTTCAGATGAGACCTCGTCTTTAACTTCTATTTCATGTTCCATTTTAACAGGAGCTGAAGGTTCTGTCTTTGCCCCCTCAATTTCATCTAATCTTGGCACATTGAATTCAACATCAAAGCCCCTGAGAACATCACCAAGTGTTGGAATAGTGAATTTTGATGACTTCTCATGCCCTTGTGaatcttttttatgtttgggTTCTATAACAACCTCTGGAACATTTGCAGTCATGGTAGTATCACTGTCTCCATCCTGAGATTTAGTTTTGGACATACTGATCTTTGACATTTTAATTGTAGGAAGTTTGAATCTGCTTGATGATCCTTTGTCTCCTTCTTCCATTTTAACAGATGCCTCTGGAAGTCCTTGAATGGTGTCTTTAACTTCACCTTGAGTTTGTGAATCACGCAATTTAATATCTGTGCCAGTGACATTTAACTTAGCAGTTGTGTCTGTGATATCCTTTTCAATGTCTGCTTTAAGTGGATACAGTTCTCCTTTTCCTTCTGTCTTGGCAGTACTTAAATcaatttttgttccttttttctcaGGAAGACTGATCCCAAATTTAGGCAACTTGAACTTACTCCCTTGCCCCTCAATCTGGATGCCTTCAACCTTCCTGTCTGTACTGATAGGTTTCTCCATTTTAGCAACATCAGACCCTTTTATATCAGCTGACAACTTTAAGTCTGCATCTGGTATACTTATTTCTGGTGCTTTAATTTGAATTTCCATAGCAGAAGTGTCTACAGACCCTTTAGAAGGTAGAGCACCTGAATCAATTTTTGGTCCTTTTACCTCTGGGAGGCTGATTCCAAATTTTGGCAGTTTGAACATACTGCCTTGCCCCTCAATTTGCACATCCTTTGCCTTCATTTCACCACTGAGAGATGTATCCTGTTTGCCAAACTCAGGCATTTTTACAACAGTTGTCAGCGGCTCACCTGACAATTCTAATTCTGCATTTGGTAGATTTATTTCTGGTCCTGTGATCTGTACATCCTCTACTTCTCCCTTTGGAACTTTAGCTCCAAATTTTGGGAGTGTGATTGAAGGGAGTTTAAACTTTGTCGGTGAGCCAaattttgttttatctttttcaCCCATTGATAAGGCAATATCTGTATTTGGCACTTCAGTGTCTACACTTGCTTCAGGTAATTTCACATCAACTTTTGGACGACTTACATCAGTTTCAGGAACCTTTGCTTCTGATTTAGAAAAGCCAAATTTGGGAAATGAAAAACTTGGTCCTTTTGTTTTCACATCAAGAGATTTAGAATCTATTACTGGAATGTCTGCTTTTAACTccatttttccttcttttagTTCAACCTCAGATGGGTGCACTTCCATTTTTTCCTTTGGTAAAGATATGTCAATCTCTGCTTTGGCAGGAGTTGAATCTATTTTCGGACCTTTTACCTCAGGAAGGCCAATGCCAAATTTTGGCAATTTGAACTTGCTTCCTTGCTGTTCAGTTTGGATATCCTTAGCCTTCAAATCAACACTGAGAGACTTATCCTCTTTGTCAAGCTCAGGTACTTTTATATCAGCTGACAGTTGCCCAGCTGACAATTCTAACTGTGCACTTGGTAGACTTCTTTCTGGTCCAGTGATCTGTACATTCTCTACTTCCCCCTTTGGAGCTTTCATTCCAAATTTTGGGAGTGTGAATGAGGGAAGTTTAAACTTTGTTGGTGAACCAAACTTTGTTTCATCTTTCTGAGCAGAATCATCCACTGATACTGTAATATCAGTACTTGGCTGTACCAAGTCTACACTTCCTTCTGGTAATTTCACTTCAGCTTTTGGAAGATTTACATCAGCTTCTGGAACTTTCTTTTCAGAATGAAAAAATCCAAATTTAGGAAATGAAAAGCttggttgttttgttttcacatcAGGACCTTTAGAGTCTATTTCTGGTACATCTGCTTTTACTTTGGCTGTTCCTTCTTTTAGTTTAACCTCAGGTGGATGCACTTCAATCTTTCCCTCAGGTAGAGATATGTCAACCTCTGTTTTGGCTGCAGTTGACTCTACTTTTGGACCTTTTACCTCAGGAAGGCTGATACCAAATTTTGGCAATTTGAATTTACTCTCTTGACCTTCAATTTGGATATCCTTTGCCTTCATATTAACACTGTCAAGCTCAGGTATATTCACAGGAAGTTTAAGCTTTGTTGGTGAGCCAAAC

Function

NR:

description
PREDICTED: integrin beta-1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU296124 True 3641 TUCP 0.39 2 21851372 21855141

Neighbor

gene id symbol gene type direction distance location
ninl ninl,LOC108263056 coding downstream 47623 21771507 ~ 21803749 (-)
gbf1 gbf1 coding downstream 149348 21605304 ~ 21702024 (-)
LOC103029456 col13a1 coding downstream 332972 21363752 ~ 21518400 (-)
LOC103041230 LOC108442385,LOC107699307,LOC107586507,LOC108263686,LOC107708387,LOC106576682 coding downstream 497398 21329881 ~ 21353974 (-)
hells hells,LOC107678596,LOC107727385,LOC107589556,LOC107708407,LOC107586490 coding downstream 585160 21253416 ~ 21266212 (-)
LOC103024928 NA coding upstream 96736 21951877 ~ 21961653 (-)
LOC103023885 NA coding upstream 113638 21968779 ~ 21990029 (-)
LOC103021922 ckb,kcrb,LOC108444021,LOC107698148,LOC108263462 coding upstream 244440 22099581 ~ 22106482 (-)
bag5 bag5,LOC107698150,LOC107708429 coding upstream 288336 22143477 ~ 22161588 (-)
ttl ttl,LOC107678537,LOC107698152 coding upstream 367399 22222540 ~ 22233232 (-)
G218241 NA non-coding downstream 114 21850360 ~ 21851258 (-)
G218181 NA non-coding downstream 207268 21643464 ~ 21644104 (-)
G218177 NA non-coding downstream 253740 21596661 ~ 21597632 (-)
G218172 NA non-coding downstream 272584 21578547 ~ 21578788 (-)
G218123 NA non-coding downstream 447850 21402294 ~ 21403522 (-)
G218261 NA non-coding upstream 31069 21886210 ~ 21886597 (-)
G218266 NA non-coding upstream 72327 21927468 ~ 21928790 (-)
G218273 NA non-coding upstream 96302 21951443 ~ 21951793 (-)
G218307 NA non-coding upstream 139678 21994819 ~ 21995213 (-)
G218314 exoc3l4 non-coding upstream 158334 22013475 ~ 22017817 (-)
LOC111195999 NA other downstream 93964 21708787 ~ 21757408 (-)
LOC103031576 cisd1,LOC105902329,LOC108443718,LOC107549159,LOC107747252,LOC107665600 other downstream 644546 21160374 ~ 21206826 (-)
G217886 NA other downstream 1769013 20081312 ~ 20082359 (-)
LOC103036840 crtac1,LOC108443504,LOC107665558,LOC107702729 other downstream 1976181 19822618 ~ 19875191 (-)
G217723 rrp12 other downstream 2508486 19336645 ~ 19342886 (-)
LOC103022835 NA other upstream 183282 22038423 ~ 22045112 (-)
G218329 eif5,LOC107589547 other upstream 196748 22051889 ~ 22056493 (-)
G218545 NA other upstream 989692 22844833 ~ 22846205 (-)
march8 march8 other upstream 1599034 23454175 ~ 23656986 (-)
LOC103032322 eif4e1c,if4e,LOC103032634,LOC108444323,LOC107690176,LOC107582514,LOC103032322,LOC108444348 other upstream 1980638 23835779 ~ 23849800 (-)

Expression


Co-expression Network