G218286


Basic Information

Item Value
gene id G218286
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 21964494 ~ 21965033 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU296176
tcctgtccagttccccgtccagtctccgtctcctgtccagttctccgtccagtctccgtctcctgtccagttccccgtccagtctcccgttcagtctccatcccctgtccagtgtcctgtcctgtctccgtctcctgtccagtctccgtccactgtccagttccctgttcagtctcagtcccctgttcaGTTTCCAAGCCCGgtccagtctcccgtccagtctttgtcctctgtcctgtctccgtttcagtccccggtctTGACTCCTGTTTTCCCtggcctctccctgccgccagcccccggggttcgtttttacgagCCTCGGGAGCTGCGAGTTTAGGGGGAGTCTTctgtcatgtcttagccctgtctcatgtctctgtgtgttttcctcacgtgacctgtactcctctgtgtctcttgtcagtagatttccaccatgtgtttctcatttgtagctccgccccttccccaggtgtttccaattctagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU296176 True 492 lncRNA 0.57 2 21964494 21965033

Neighbor

gene id symbol gene type direction distance location
LOC103025447 NA coding upstream 44910 21911958 ~ 21919584 (+)
LOC111196000 NA coding upstream 110074 21851372 ~ 21854420 (+)
LOC103025756 NA coding upstream 113157 21827251 ~ 21851337 (+)
aifm2 aifm2 coding upstream 148196 21809671 ~ 21816298 (+)
gins1 gins1,LOC107727378,LOC107708421 coding upstream 192629 21767574 ~ 21771865 (+)
LOC103024407 NA coding downstream 23845 21988878 ~ 22010969 (+)
LOC103023340 NA coding downstream 59108 22024141 ~ 22031440 (+)
eif5 eif5,LOC108435020 coding downstream 84086 22049119 ~ 22056501 (+)
trmt61a trmt61a,LOC107582491,LOC107698149,LOC107589545,LOC107678528 coding downstream 142536 22107569 ~ 22120114 (+)
apopt1 apopt1 coding downstream 197032 22162065 ~ 22166393 (+)
G218285 NA non-coding upstream 69 21964159 ~ 21964425 (+)
G218279 NA non-coding upstream 8086 21956027 ~ 21956408 (+)
LOC111196027 NA non-coding upstream 19692 21941514 ~ 21944802 (+)
G218187 NA non-coding upstream 200515 21755427 ~ 21763979 (+)
G218158 gbf1 non-coding upstream 262498 21655171 ~ 21701996 (+)
G218298 exoc3l4 non-coding downstream 47112 22012145 ~ 22017817 (+)
G218331 ckb,ckba,kcrb,LOC108444021,LOC107735686,LOC108434982,LOC107698148 non-coding downstream 134483 22099516 ~ 22106537 (+)
G218335 NA non-coding downstream 172830 22137863 ~ 22143176 (+)
G218348 NA non-coding downstream 258541 22223574 ~ 22268752 (+)
G218364 NA non-coding downstream 306857 22271890 ~ 22285011 (+)
LOC103032529 prkg1,LOC108443637,LOC108263833,LOC103355670,LOC103373746,LOC107665604,LOC107747254 other upstream 1548851 20335947 ~ 20415643 (+)
G217874 nkx2-3 other upstream 1890151 20020414 ~ 20074343 (+)
rrp12 rrp12,LOC106529656 other upstream 2619090 19323906 ~ 19345404 (+)
LOC103040131 ptpn20,LOC108443401,LOC102205930,LOC108262844 other upstream 2747505 19160653 ~ 19216989 (+)
cxcl12 cxcl12,cxcl12a,LOC107707253,LOC107673912,LOC106604225,LOC107588617,LOC107548639 other upstream 3117466 18837344 ~ 18847028 (+)
mark3 mark3 other downstream 95930 22060963 ~ 22098259 (+)
G218351 NA other downstream 252266 22217299 ~ 22218860 (+)
kcnma1 kcnma1,LOC108263740 other downstream 598765 22563798 ~ 22818114 (+)
G218651 NA other downstream 1731544 23696577 ~ 23708243 (+)
LOC103041715 zgc:154058,LOC103041715,LOC108441772,LOC107733751,LOC107690163,LOC107570530,LOC107582519,LOC103387327,LOC107708463,LOC108263524 other downstream 2016102 23981135 ~ 24028981 (+)

Expression


Co-expression Network