G218329 (eif5,LOC107589547)


Basic Information

Item Value
gene id G218329
gene name eif5,LOC107589547
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 22051889 ~ 22056493 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU296233
CATTTGGGAATTTCAAGGCTCAGTGGTTAAAAACACTTGGTAAATTATAGTATGCTTGTGGATTTAATACATATGTTTGGAAAGCTACCACTGCTTTCATCACAAAACAAAGTACAAAGGCTCTTACAACTGCATCTGGGGCGTCAATCTCATTATGGTTCCCACCATCTCCACTGCCTGAACCATTTTCTTTGTCCTTCTTACggttcttcttttctttctccttcttcaCAGACCCACTGTCACTTTCTGTGTTCAAAGACAATGAGCAAATTAATCACAGCAAAGAAACATTTGTTGGCATCCTTGTCAAAATGAGCACaagacacacacatgcaaaaaaaagcattgaGACAGTTATCGTTATTCCTGCAATTTATGTTACTCAAAGCACCTTAATGCATACAactttttctatattttcatAGAAACGCTTATTCTTATTTGATGTTATTCCAAGTAAAAGGTAATCAGTACAGAAACTAACCTGGTGGATTTTTAAGGATGAACGTGCAGAGTTTGTGGCGAGTGTCTAGCATGCCCCGGTACCCACAGGCTTTACAGGAGTTTCCAATGGTTTGTTTCTTTGGATTAATATGCTGGAAAAtatcaaacaaacattttttttccccaaaggtTTCCCTTCTTTTTACCCTACTGCATCAACAAAAttgcttaaatgtatttttcaaagAAAACGTAATTACTACACTTTAAAAacttaatataacttgtattctGTATCCAATTCAACAATcaaaattatttgtttaaaaatagccAGTCTTAGTGTTCAGCCATTcatttgcacagatattttcaGGGCAACAGTCCAACGTACTAGGTCGGTCTCGGGATTGTCACACTCGGGGCAAAGCACAAACTTGCGGATGAATCCATCCAGCATGTCCTGTAGTTTGTTGGCCTCGTGGGAGCCGTTCACTATGTATCGGTCATTCTTTGTGTCAAACTGGGTCTGCGCCCCCAACTCACAGCCAAAAAACTTGGTTGGatatgTTGGAGGCCGGTTCAGTGCCTTTGCAACATCAACCATGTTGACAATGACTGTCTTGATTCCATTTCCTTTGCCTTCCACCTGGTAGACAAAATAAGAGTAATAAatcatacattttaaactgttttaattgtattttccgcagagcagctctcagctggCACCAAACTATTAATGGGTTTCAGTACCTTTGCAATCAGACGGGGCATCTTGTAGCGGTAGAACTGGTCCGACACATTGCGGTTGACGTTGACAGACATTTTGAGTGGCTTGCAGCACTATCAGCAAGATAAGAAGATCTTGGATGGGGATTTTTTGGTATCTTCTGTCTGGAGAAGAAGGGATGACATAAACGACTGCAAGCGTGCTCGGTCTCTGACATGAAAAAGATTTTGCCACAGTGGCTGCAAGTTTCTTGCTCGTGGTCTAGGTTTACACCGCTCGCGTTCCAACAGCTGCGCAACAGC
>TU296239
aaaagaaaaattttatttaatgactgaacaaaatgaaaacaaatcaCAAACAATTGTGCAGTTTAAGTAAATCAAAATAAGTCAAACTCACAATAGAATTCTCAATACAGAAAGCTTAAACATTACATATTTTAGCTCAGCAGCAGCAAGACAATGAAAGCGCTGTGTTAAAACCATGCCTCATTAGCCAGGATAGAGTAAACTAGTGGAAAGAATATATGGAAAAGAAGAAAGGGCACAATAGGAGGCCATTGTGATTAATTTTAACATTGGAGAGGAGTTGGGAAAGTTCTAAATTGGCTGCCATTCAggtttctctcctctctttttaaATGGCATCAATGTCAAGGTCATCCTCCTCCTCGGTTTTCTCTGGCTCAACAGTCTCCACTTTTAGCTCCCGGGCTGAGGAAGAGTACACAACCTCAACATtctcatcctcttcctcctcctcttcttcgcTTCCCTCACTCTCCTCCTCTGCCTCCTTCAGCCATTTGACAAAGGGTGCTGCCTTGGCATGGATTTCCTTAGCCAGTTCCTTGGAGACATACTTCTTAGAAACCTTTTCAGCCCAGGTGAGGATGACATCCTCCTCCAAAAGGTCAGCATCATACAGATCCTTGAGTATGATTGGAACTCTAGGCAGCAGCTGGGTTTGGTGCAACTTTACCACACACTCAAAACCACCCATCAGGTATTTCTGAGCCTTCTTATCACTATGGCAGAAACGTAGAAAGTGacgtttgtatttttttatctggtCTCTGATGTTTTCATTGAAGAGCAGTTCACTCAGAATAAGCGGTCCCATGGCCCTCACATCTAGACGCTCTGCCTCAGCCAGAATGTCCTTATCTGCAGAGTCTATTGCtccactctctttcttttgTTTCACAAAGTTATAAAACATGTTGACTCTCTCCTCAAGGGGCTTCTCTAGGTCCTCGCTGAGAGTCAGATTCTTAGCATGGTCACTGATCTCCTCCATTCTGCGACGCTGGGCCTCTTCAGTGGTCTCTTCGGCCCagtcctcatcatcatcatctccatGAACTGCATCTGGGGCGTCAATCTCATTATGGTTCCCACCATCTCCACTGCCTGAACCATTTTCTTTGTCCTTCTTACggttcttcttttctttctccttcttcaCAGACCCACTGTCACTTTCTGTGTTCAAAGACAATGAGCAAATTAATCACAGCAAAGAAACATTTGTTGGCATCCTTGTCAAAATGAGCACaagacacacacatgcaaaaaaaagcattgaGACAGTTATCGTTATTCCTGCAATTTATGTTACTCAAAGCACCTTAATGCATACAactttttctatattttcatAGAAACGCTTATTCTTATTTGATGTTATTCCAAGTAAAAGGTAATCAGTACAGAAACTAACCTGGTGGATTTTTAAGGATGAACGTGCAGAGTTTGTGGCGAGTGTCTAGCATGCCCCGGTACCCACAGGCTTTACAGGAGTTTCCAATGGTTTGTTTCTTTGGATTAATATGCTGGAAAAtatcaaacaaacattttttttccccaaaggtTTCCCTTCTTTTTACCCTACTGCATCAACAAAAttgcttaaatgtatttttcaaagAAAACGTAATTACTACACTTTAAAAacttaatataacttgtattctGTATCCAATTCAACAATcaaaattatttgtttaaaaatagccAGTCTTAGTGTTCAGCCATTcatttgcacagatattttcaGGGCAACAGTCCAACGTACTAGGTCGGTCTCGGGATTGTCACACTCGGGGCAAAGCACAAACTTGCGGATGAATCCATCCAGCATGTCCTGTAGTTTGTTGGCCTCGTGGGAGCCGTTCACTATGTATCGGTCATTCTTTGTGTCAAACTGGGTCTGCGCCCCCAACTCACAGCCAAAAAACTTGGTTGGatctaaagaaagagaaagacaaaactTGTATGCCTTGACAGGTCTTTTG

Function

symbol description
eif5 Predicted to enable GDP-dissociation inhibitor activity; eukaryotic initiation factor eIF2 binding activity; and translation initiation factor activity. Predicted to be involved in formation of cytoplasmic translation initiation complex and formation of translation preinitiation complex. Predicted to act upstream of or within translational initiation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytosol. Is expressed in lens. Orthologous to human EIF5 (eukaryotic translation initiation factor 5).

NR:

description
PREDICTED: eukaryotic translation initiation factor 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU296233 False 1482 lncRNA 0.40 2 22051889 22053747
TU296239 True 1988 TUCP 0.41 6 22052687 22056493

Neighbor

gene id symbol gene type direction distance location
LOC103023885 NA coding downstream 61860 21968779 ~ 21990029 (-)
LOC103024928 NA coding downstream 90236 21951877 ~ 21961653 (-)
ninl ninl,LOC108263056 coding downstream 248140 21771507 ~ 21803749 (-)
gbf1 gbf1 coding downstream 349865 21605304 ~ 21702024 (-)
LOC103029456 col13a1 coding downstream 533489 21363752 ~ 21518400 (-)
LOC103021922 ckb,kcrb,LOC108444021,LOC107698148,LOC108263462 coding upstream 43088 22099581 ~ 22106482 (-)
bag5 bag5,LOC107698150,LOC107708429 coding upstream 86984 22143477 ~ 22161588 (-)
ttl ttl,LOC107678537,LOC107698152 coding upstream 166047 22222540 ~ 22233232 (-)
ikzf1 ikzf1,LOC107698154,LOC107721232,LOC107708437,LOC107589539 coding upstream 194239 22250732 ~ 22274892 (-)
spata48 NA coding upstream 228059 22284552 ~ 22296772 (-)
G218314 exoc3l4 non-coding downstream 34072 22013475 ~ 22017817 (-)
G218307 NA non-coding downstream 56676 21994819 ~ 21995213 (-)
G218273 NA non-coding downstream 100096 21951443 ~ 21951793 (-)
G218266 NA non-coding downstream 123099 21927468 ~ 21928790 (-)
G218261 NA non-coding downstream 165292 21886210 ~ 21886597 (-)
G218369 NA non-coding upstream 4552 22061045 ~ 22061924 (-)
G218370 mark3 non-coding upstream 27682 22084175 ~ 22091958 (-)
G218371 mark3 non-coding upstream 31702 22088195 ~ 22097788 (-)
G218374 NA non-coding upstream 42649 22099142 ~ 22099395 (-)
G218376 trmt61a,LOC107582491,LOC107698149,LOC107678528,LOC107589545 non-coding upstream 52682 22109175 ~ 22120063 (-)
LOC103022835 NA other downstream 6777 22038423 ~ 22045112 (-)
G218240 NA other downstream 196748 21851372 ~ 21855141 (-)
LOC111195999 NA other downstream 294481 21708787 ~ 21757408 (-)
LOC103031576 cisd1,LOC105902329,LOC108443718,LOC107549159,LOC107747252,LOC107665600 other downstream 845063 21160374 ~ 21206826 (-)
G217886 NA other downstream 1969530 20081312 ~ 20082359 (-)
G218545 NA other upstream 788340 22844833 ~ 22846205 (-)
march8 march8 other upstream 1397682 23454175 ~ 23656986 (-)
LOC103032322 eif4e1c,if4e,LOC103032634,LOC108444323,LOC107690176,LOC107582514,LOC103032322,LOC108444348 other upstream 1779286 23835779 ~ 23849800 (-)
G218720 LOC108444338,LOC104946244,LOC101064687,LOC103387332 other upstream 1794470 23850963 ~ 23857507 (-)
G218781 NA other upstream 1999032 24055525 ~ 24056877 (-)

Expression


Co-expression Network