G218448 (anxa11,anxa11a,LOC108263209)


Basic Information

Item Value
gene id G218448
gene name anxa11,anxa11a,LOC108263209
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 22441756 ~ 22451936 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU296444
ttttaaacatgctttatttttctttttttttaggtaataaATTGTCTTGGCAAAACACAAGAGTACAAACAAAGCAAGCAAATAACACAGTGAAGTCTCTTTAATTACCTGATTGGGTTTGtttatgtacttatttatttattcattcataattTCCCAGCCGATTGGTGCTTGCTGTAATgtctaataaaacaaatatgtaaacacataaagataataataatgtagaAATGTTATGGCATAATGTTAAAACTAATCAGGAATCTCTGTAAAGGTGTTTAATTTGTTGCTATTGCAATACTAAACACATTATGTATTAATCTAATAATAAATCTCATAGTTTTCAGCAACTACTATTTTTACTCTATTTTAACATTTCCTAATTAACAGAAACAAAAGCTACTTTTTATTTGGCACTTTGGTTAATACTCATTTTACATTTAGTAaaactttactaaaacatatGTAAGCATACATAAATATCTTCTCCTCTAATTTTttcagcaaaaatatatatggccaatgtttcttaaaatgtttcatcATTCAACTATGGCTTAAAATACAACATGGTCAGTCAAAGGCCtagttaaagaaaaacatatatataagctattccctttaaaataaagatttgtaTAAAAGACAGCATATAAATTCATACTTTGGCAAAAATGTGAACTAATGCAGATTATGGCAACAGCATGCAACTGTAGTAGAGTGCATAGAGAATATGATTTgtataaacaaacacaacacataGCATTTCATCCTCTTCGCTGCGATGAAAGCTGCCCCATCTTAATCACTTCCACCACAAAGCTTCAACAGCAATTTCTTGTAATCCCCTGAAGTGTCTCCAGAAATGTCTGTGTAGAGGGACTTCCCATACTTCTTCACATATGCCTGGCGGATGTCCAGCATGTCCACCTCAGAACGGGACACCATGATGCGGATCAGAGTGCGGTCTTTAGTTCCCAGTCCCTTCATCGCTTTGTAGAGTCTCTCAGCAAAGTAGGTTGGCGTGTCCTTAATGCACTTCACAACTGCCAGCATGCCATTCTCCAGATCCCCGGACATCTCCCTCTCAATGCTCTTCTCAATGTCTCTGCCACACATGTGCTGGTACTCATTAAACACTGCTCTAAGGTGAGGTTTGCTCCGAGCACACAGGATGGCGTTAAACTTGGACTCATCAGTGCCCAGTTTATTTTCTCCTGCTTGATAAAGAGTCTGAGCATCTTGTTTGGCTAATGCTATAtccacattctctctctcatcacgattacccTGAGCAAGAGAGACCAGCAGTCTCCGGAAGTGTCCTGAGGTGTCTCCACTGATGGAATCCTCCAGTGATTTCTTGTACTCAGCTTTGAAGATTTGATTGATTTCTCTGATCTCTGCATTGGAGCGAGAGGACAGGATCTCGATCAGACAGGCCTCATCAGTCCCAGCTCCCTTAATAGCCTCTCTTAGCTCAGATGCATCATACTGAGCAGGAGTCTTTAACATGGCCAGCACCAGCTTCTCAAAGTTCCCAGAAAGCTCAGACTTCAAATCCTTAACCAAGTCCTGGAgaaacagcataaaataatatcggacatatcatatataataatatatttaaatatatattcaggactgtatcaaaaaaaaagaaaaaaagaaaatgtatacaTAAACACTACACTTACATATAAATACTA
>TU296447
TTACCTATATTAGAAAttagacttttattttacatttcagttttaatTAGATTAGCTTTGTTTTGTTGGTTATTTTAAAGTCTAATCTGagtcaattttatttttaaaacttacATTCTCAAATGTTaagaatttattatttttattttacgaATCAGCTCTTAATTtgttcaatttattttattatttactcttATTCTTCTAATATCTTAATTGTTTTACCTTTTTCTATTATCTTGAttctatttttcacattataaggcactctttaaatcatttaattttctctAAACTTgatagtgtgtcttataattCGGATAACTGAATTTTAGGTTGTAAGaaacagtaaagacactccgctgaagtacagcactataaaagagtttcagtgaagtttcttcagcactgaggcttgagcagtattagcattagccgctaactgcagcgctagctctttcgtcattcagaggtgagtatatcagactgtagtctgcacgtttaccttgttaaaacaagctacatgggacaaactgctaagtaatagtgccctggcttaccataACAcacagagttcctcagtgtagcgctgtcaggtggcatttactagcgcttagcactgctaaccacccGTGTCAGCACTATaatagcgctgctgctaaccgcgctataATACTCTAAATctaggcttactgtaaataaacagaagtgctttacttacacaaataaacagtttttttaggagagaaatctgtgtacattATTATCCAGTGCTCATATGACTTtgaaagaagtttttttttttttaagaattaaagtatTGTTTACTTAGTTGCCCCTAGTGACAAGACCTGCTGTataagaaggaaaacatgtctttacacctgttccttactattgtctcttaaaatgcgccttatattcCGGTGCGGCTTATGTATGAACATAGACCACAAAATAGACTTTCAtttaaagtgcaccttataatactgtgtgctttatagtctgtaatatatgtttttattatatatcaattaaatatcaattaaatattattttattttctcttttattttttgtctactGTAAATCCTGGGCTACACGGTAAACAAGGGTTGCCCTCTATTTATTTTCTGAGTAAAAAGAAAGATATGAGGGATgagcttttaatgttttttttaatctaacaCTAATTATACTATCAGTACCTGACCTAAACACAGTTTTTGTGGATAAATGCAaacaaatccttacagcaatgttccaatCTCTAAAGCCTTCCTAGAAGAGTAGGAGCTGTTATTGGACCAAAGTGGGGGGAAAACACTCTATTTATGAAAGCCTTTGATATCTGCAGCAATGTGTCCACACTTTTGGACATACTGTGTAATTTTCTGCTATAGAAAACCCACAGAATGAGTCTAAAATGTTGTTTACTAAAATATTTCAATCTATTATCAACACATTCACAGAaaaggacagagagaaaagatgcagggtctgaaaacTGAAGGACAAAGCACTATAAATGGTGTGTTGACCtaaaagagacacacacagcatcacactgaaAACCACCATGCACTTTACACACAGGATGAGGGTCAGACAGCACAgcaatgtgtgaaaatgtgagaCAGTGTATCACAGTGTTCATCAACTCAATTCATAGATAAATGTTTATCACATTACCATTACCCTGAGAGCGGACAGCAGCATAGAGGgcattttaagaaacacaaaGTAGTTAAATGAGAATGTTTACCTTCGAATGATATCTAAAGGGTATGCTTAACAACTATATCTGACTAAGCCAATTGGAGGACAAGATTTTGATGATAACGATGATAATGatagttttaaatacactacacagtgttttaaatctgtatatgagctttaaattatatacaatatactgaTACAATAATGGGTTGTACACATAAGCACCATTATTACGCTGAGATGCCAAAAGTCAGGGAATAGCAGTATGTGAATTGTTCATGAGGTGTGGTGTTTTAGAGGACAGCTTGGGAACAACTGCACCTGTGtcttgtgaggtgttatctagtgagtgaggctaaacactgtccagtgtgctcatggcaaagaGACAAGAATTATCGGAGTATAAGTATGAGCTGAGCTGtgggaaaaatgaagagattacttgagtttttgaatcagtttctctgattttgctatttataggtatatgtttgagtaaaattaatactgttgttattgttgtacagacaaaatttctcacaaattccaagtccaaataaaaatattttcatttatgagaaaaatgaaaaaaaaaaatgaatgaaaaaaaaaaaatgcagagctttcaaacctcagataatgcaaaatttataaagatttaaaagttaaaaaaagaataggtggaataaccctggtttttattcatagttttaatgcatcCTGGCATCCtttaccagtcttacacactgcttttggatagtattatgccacccctggtgcaaatattcaagcagttcagcttgttttgatggcttgtgatcatcgatCTTCCTCtaaattatatttcagaggttatcAATTttgaaaatcagagaaactcattattttaaactggtctcttttttccagagctgtagcctgtgcaaacagacaaacaattTTGACAGAAATCAGTGTCAGAAAAGTGTAGCATTGTTCAGTTGTCATAGGATGTGGCATAAATCATGGGTCATGACACTCttttctgtcccatgacttttggcatttcaAGATACAATATATAGAATCATGAATCATTTCTCACTATAGTTataatagacaaaaaaatagGAGATTATCACACCCTGTAGGTCTAATCaagctaaaaacaaaaacaagctgGGTACAGATTACAGCACTTACCAACTGCCAGCATGCCATTCTCCAGATCCCCGGACATCTCCCTCTCAATGCTCTTCTCAATGTCTCTGCCACACATGTGCTGGTACTCATTAAACACTGTACAAACAAAGCAGAAACATGAGTGGTGCCTATAAATACTGTCCTCAGCTAACATTACAGCATGCATTCCTCAGTCCTAGAGCAACTGTAGGTctttaaattaaacacacatCTAGCTGCCcatgttttttaaaggtgtcctttTGCTAAATTCCActatttcttgttgtttgtgaaattcaataggtctctctgagt

Function

symbol description
anxa11a Predicted to enable calcium ion binding activity. Predicted to be involved in cytokinetic process and phagocytosis. Predicted to be active in cytoplasm. Is expressed in several structures, including cardiovascular system; ectoderm; integument; mesoderm; and musculature system. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis type 23. Orthologous to human ANXA11 (annexin A11).
anxa11 Enables S100 protein binding activity and calcium-dependent protein binding activity. Involved in cytokinetic process; phagocytosis; and response to calcium ion. Located in several cellular components, including cytoplasmic vesicle; midbody; and nucleus. Implicated in amyotrophic lateral sclerosis type 23.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU296444 False 1709 lncRNA 0.36 9 22441756 22451936
TU296447 True 3204 lncRNA 0.34 2 22445856 22449196

Neighbor

gene id symbol gene type direction distance location
LOC103042035 zgc:110045,LOC108444131,LOC107582498,LOC107721227,LOC107678543,LOC107708438,LOC108262845,LOC107698144 coding downstream 46836 22379123 ~ 22394920 (-)
vwc2 vwc2,LOC107589538,LOC107678488,LOC107698155,LOC107721217 coding downstream 82143 22328143 ~ 22359613 (-)
spata48 NA coding downstream 144984 22284552 ~ 22296772 (-)
ikzf1 ikzf1,LOC107698154,LOC107721232,LOC107708437,LOC107589539 coding downstream 166864 22250732 ~ 22274892 (-)
ttl ttl,LOC107678537,LOC107698152 coding downstream 208524 22222540 ~ 22233232 (-)
lrmda cunh10orf11,c3h10orf11,c13h10orf11,LOC103041229,LOC107747465,LOC107678567,LOC107708444,LOC105909757 coding upstream 394346 22846282 ~ 23286449 (-)
LOC103037680 vdac2,LOC108444242,LOC107747461,LOC107582506 coding upstream 986720 23438656 ~ 23446125 (-)
zfand4 zfand4 coding upstream 1210762 23662698 ~ 23691895 (-)
washc2c NA coding upstream 1241320 23693256 ~ 23708270 (-)
LOC111195939 fam21c,LOC107678570,LOC107589565 coding upstream 1257349 23709285 ~ 23714358 (-)
G218441 NA non-coding downstream 22383 22416898 ~ 22419373 (-)
G218435 NA non-coding downstream 34007 22405961 ~ 22407749 (-)
G218423 NA non-coding downstream 42210 22396092 ~ 22399546 (-)
G218388 NA non-coding downstream 237293 22202153 ~ 22204463 (-)
G218387 klc1 non-coding downstream 252165 22179388 ~ 22189591 (-)
G218519 kcnma1 non-coding upstream 357883 22809819 ~ 22818104 (-)
G218527 NA non-coding upstream 391065 22843001 ~ 22843214 (-)
G218602 NA non-coding upstream 1007556 23459492 ~ 23467044 (-)
G218698 NA non-coding upstream 1306495 23758431 ~ 23760825 (-)
G218703 NA non-coding upstream 1331882 23783818 ~ 23784105 (-)
G218329 eif5,LOC107589547 other downstream 385263 22051889 ~ 22056493 (-)
LOC103022835 NA other downstream 396644 22038423 ~ 22045112 (-)
G218240 NA other downstream 586615 21851372 ~ 21855141 (-)
LOC111195999 NA other downstream 684348 21708787 ~ 21757408 (-)
LOC103031576 cisd1,LOC105902329,LOC108443718,LOC107549159,LOC107747252,LOC107665600 other downstream 1234930 21160374 ~ 21206826 (-)
G218545 NA other upstream 392897 22844833 ~ 22846205 (-)
march8 march8 other upstream 1002239 23454175 ~ 23656986 (-)
LOC103032322 eif4e1c,if4e,LOC103032634,LOC108444323,LOC107690176,LOC107582514,LOC103032322,LOC108444348 other upstream 1383843 23835779 ~ 23849800 (-)
G218720 LOC108444338,LOC104946244,LOC101064687,LOC103387332 other upstream 1399027 23850963 ~ 23857507 (-)
G218781 NA other upstream 1603589 24055525 ~ 24056877 (-)

Expression


Co-expression Network