G218545


Basic Information

Item Value
gene id G218545
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 22844833 ~ 22846205 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU296561
ctggtaATAAAAGATGAACTGTTGATCTTTTGTTTCATaatcatattttaatgttaaacccTAAagtttcagtctacagcagaaataaaatgattggcctcactgtttcaatacttttgggtTTTGGAGAGCACTATATctctaaaataaagaaaaaagtgacatttttttgtaagttttattgGGTTTGTGTATAATTGTGAAAGTTTAAATAGGTCTTTAAAAAGGCATGAAGGTCTGAACACCAACAGcgattttatatttcattattttcttttttcgtaAGTCAGCCCTTTACCTCAGGAAAAATATGTGGTAATGTCTTGCattgttttttaacacaaacTTTAGAACCACTATTGATTTTAATCATCAAAATATTATTTAGAATACCATATAATGTACAATGGTATAATATAATGTGCGATTCATTTGAATGAGTTTCTTAGACTGAGAACACTTGATGAAAACTTTATTTtgttgaaagtatttttttcttttttttatttggcgaGTGAGGGGCATTTTGCAGCCTCCTCACACTCTGGCCTTATGCATGCTTCTGCGTATGTGTGGAGATATTAAgcgtgtgtatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgctgtgTGAAGCTGGTGTGTTGCGGGGGCAGATGTTGCCGTGCAGGAGCCTGGAGGAGCAGGGAAAGTGGGAGGTAATGAGCTTTGCTCTCGTTGCTTGGGTtcaggagaggagagagggagagagagagagagagagagagagagagagagagaggaaggaaggACTGAGAGGAGGGGGAGAGAAGTCAACAACTTTCTCCATTCCACTTCTGATTGCCTCCTCATGTGGGTTTTGGACCTATTCACACCATTTTAATGACTTGCTCTCTAACTTTTGTTTatggaaaggaaaataaaaaaaatctataacagCTTTTACTGAGTATCTGAAGCGATGGCCAAAATGTTTTGGGGAAGGTTTCGCACATCAAGTACATTAGATTCAGCACGCCtgaataatgttttactgttttatatttttccaagaTTTTCtttaatgctttcatttaaatgctttattgtTTTGCTTTTGAAATATTGTATTTCAGATTTAATTGATGAACGTACTGCACCAAAGCAAGATGTAATGGTGAATTACACGAGGGGAACCAAAGATCTAAATAGACTAAATTACTCTCAGTCATGCCATTAATTCATCCGTTCCAAGGCAATCctatgtttttcatttatttttgtgagAAGATGGGCCAAGTCCTCTTTTTTCTACTGAATTatgcatttctgtttgtttttttattgcattacaGTCATATATAACCACTGATTAGCAGAGTAATTAGATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU296561 True 1373 TUCP 0.36 1 22844833 22846205

Neighbor

gene id symbol gene type direction distance location
LOC103042035 zgc:110045,LOC108444131,LOC107582498,LOC107721227,LOC107678543,LOC107708438,LOC108262845,LOC107698144 coding downstream 449913 22379123 ~ 22394920 (-)
vwc2 vwc2,LOC107589538,LOC107678488,LOC107698155,LOC107721217 coding downstream 485220 22328143 ~ 22359613 (-)
spata48 NA coding downstream 548061 22284552 ~ 22296772 (-)
ikzf1 ikzf1,LOC107698154,LOC107721232,LOC107708437,LOC107589539 coding downstream 569941 22250732 ~ 22274892 (-)
ttl ttl,LOC107678537,LOC107698152 coding downstream 611601 22222540 ~ 22233232 (-)
lrmda cunh10orf11,c3h10orf11,c13h10orf11,LOC103041229,LOC107747465,LOC107678567,LOC107708444,LOC105909757 coding upstream 77 22846282 ~ 23286449 (-)
LOC103037680 vdac2,LOC108444242,LOC107747461,LOC107582506 coding upstream 592451 23438656 ~ 23446125 (-)
zfand4 zfand4 coding upstream 816493 23662698 ~ 23691895 (-)
washc2c NA coding upstream 847051 23693256 ~ 23708270 (-)
LOC111195939 fam21c,LOC107678570,LOC107589565 coding upstream 863080 23709285 ~ 23714358 (-)
G218527 NA non-coding downstream 1619 22843001 ~ 22843214 (-)
G218519 kcnma1 non-coding downstream 26729 22809819 ~ 22818104 (-)
G218448 anxa11,anxa11a,LOC108263209 non-coding downstream 392897 22441756 ~ 22451936 (-)
G218441 NA non-coding downstream 425460 22416898 ~ 22419373 (-)
G218435 NA non-coding downstream 437084 22405961 ~ 22407749 (-)
G218602 NA non-coding upstream 613287 23459492 ~ 23467044 (-)
G218698 NA non-coding upstream 912226 23758431 ~ 23760825 (-)
G218703 NA non-coding upstream 937613 23783818 ~ 23784105 (-)
G218697 NA non-coding upstream 939162 23785367 ~ 23786980 (-)
G218709 NA non-coding upstream 969666 23815871 ~ 23816669 (-)
G218329 eif5,LOC107589547 other downstream 788340 22051889 ~ 22056493 (-)
LOC103022835 NA other downstream 799721 22038423 ~ 22045112 (-)
G218240 NA other downstream 989692 21851372 ~ 21855141 (-)
LOC111195999 NA other downstream 1087425 21708787 ~ 21757408 (-)
LOC103031576 cisd1,LOC105902329,LOC108443718,LOC107549159,LOC107747252,LOC107665600 other downstream 1638007 21160374 ~ 21206826 (-)
march8 march8 other upstream 607970 23454175 ~ 23656986 (-)
LOC103032322 eif4e1c,if4e,LOC103032634,LOC108444323,LOC107690176,LOC107582514,LOC103032322,LOC108444348 other upstream 989574 23835779 ~ 23849800 (-)
G218720 LOC108444338,LOC104946244,LOC101064687,LOC103387332 other upstream 1004758 23850963 ~ 23857507 (-)
G218781 NA other upstream 1209320 24055525 ~ 24056877 (-)
LOC103045183 emx1,LOC103045183,LOC108441775,LOC108263581,LOC107567848,LOC107678523,LOC107733702,LOC107690190,LOC102233543,LOC103458176,LOC103150078,LOC107097582 other upstream 1837032 24683237 ~ 24700649 (-)

Expression


Co-expression Network