G218758


Basic Information

Item Value
gene id G218758
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 24059211 ~ 24063788 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU296854
GTTAATGTGCATCTAAGTAAGTGGATGAATATTCTGTATTGTAAAGCATTGTGTGATCCTAGCAACAGTAAACAAACACTTCTGTTAGAATTCTATGTTTcgtgattatttaaattatcaggtttttaaatttcatttaagCATTGGAGTAGATTTACAGAGGCTGACCACAGTTGAACCATGAACaagattttttatataaatgacaGGTACCACTGGTACAGGGAAGGGTACCCAGGACCATATCTTacggcGACTAAAAGGGTTCTCAGTGCCCCATGGGAAAAAAACCCAGAGAAGAACCACTATGAGGCCACGCATGAGAAAAAAGAGGAGAACTCAGAGCTGGATGATTCCCTCCTCCTTTCAGACAGCGAAGACTGTTCACTGGAGGATTCTAATTTGGACGAAACCCTCctcgatgatgatgatgatgatgaagaggagTATGGATGTCATCAGACCTAAAAGACCCCCCTCCTCACCACCCTGTTTTTGCtggatttgttttagtttatgaattaaatgtgattat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU296854 True 535 TUCP 0.40 5 24059211 24063788

Neighbor

gene id symbol gene type direction distance location
LOC103042015 LOC108441770 coding upstream 81619 23970690 ~ 23977592 (+)
LOC111196020 LOC105007542 coding upstream 89880 23965642 ~ 23969331 (+)
LOC111195965 LOC105007542 coding upstream 97110 23959074 ~ 23962101 (+)
LOC111196037 LOC105007542 coding upstream 105406 23950856 ~ 23953805 (+)
LOC111195940 LOC108263518,LOC108444380,LOC108442180 coding upstream 125599 23932621 ~ 23933612 (+)
pdzd7 pdzd7,LOC107690160,LOC107678494 coding downstream 28389 24092177 ~ 24130745 (+)
LOC103045799 cpxm1,cpxm1a,LOC107678553,LOC107708467 coding downstream 365884 24429672 ~ 24446638 (+)
LOC103040903 NA coding downstream 431865 24495653 ~ 24507303 (+)
LOC103042321 LOC103042321,LOC108441753 coding downstream 447553 24511341 ~ 24515822 (+)
mrps26 mrps26 coding downstream 453626 24517414 ~ 24520954 (+)
G218754 NA non-coding upstream 39753 24011875 ~ 24019458 (+)
G218743 NA non-coding upstream 113399 23945558 ~ 23945812 (+)
G218742 NA non-coding upstream 120937 23938070 ~ 23938274 (+)
G218688 NA non-coding upstream 278707 23780213 ~ 23780504 (+)
G218681 NA non-coding upstream 295774 23763218 ~ 23763437 (+)
G218795 sfxn3,LOC103040609,LOC108263463,LOC108441766,LOC107708462,LOC107678536,LOC105911632 non-coding downstream 19151 24082939 ~ 24091553 (+)
G218799 NA non-coding downstream 70388 24134176 ~ 24137086 (+)
G218836 NA non-coding downstream 217917 24281705 ~ 24282056 (+)
G218841 NA non-coding downstream 253854 24317642 ~ 24318194 (+)
G218842 NA non-coding downstream 254479 24318267 ~ 24321592 (+)
LOC103041715 zgc:154058,LOC103041715,LOC108441772,LOC107733751,LOC107690163,LOC107570530,LOC107582519,LOC103387327,LOC107708463,LOC108263524 other upstream 30230 23981135 ~ 24028981 (+)
G218651 NA other upstream 350968 23696577 ~ 23708243 (+)
kcnma1 kcnma1,LOC108263740 other upstream 1241097 22563798 ~ 22818114 (+)
G218351 NA other upstream 1840351 22217299 ~ 22218860 (+)
mark3 mark3 other upstream 1960952 22060963 ~ 22098259 (+)
fam213a fam213a,fam213aa,LOC107690162,LOC107733773,LOC107582522 other downstream 707 24064495 ~ 24071626 (+)
LOC103046104 LOC108441759 other downstream 379503 24443291 ~ 24466867 (+)
G219050 NA other downstream 778514 24842302 ~ 24842533 (+)
dapp1 dapp1,LOC107579178,LOC107556904,LOC107667071,LOC107585227,LOC107733757 other downstream 1097939 25161727 ~ 25174708 (+)
G219171 cunh4orf32,c3h4orf32 other downstream 1193162 25256950 ~ 25302587 (+)

Expression


Co-expression Network