G218781


Basic Information

Item Value
gene id G218781
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 24055525 ~ 24056877 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU296881
AGGGCACTGAGGAGCTGAGGGCTGCCTGTCTGCAGTGGCAGGGTGAGGGTCCAGACCCCTGGATGGAGCTCAGGAGGGTCCAGCATGAGTTCCTCGAGGGGAAGCTGAGGGCCCTCATTCAGAAGGTGGAGTCTCACTGCGCACGCGACTCTCCCACTCTCCTGCCTTTTTGCGAGGAGCCAGACCCCTGGATGGAGCTCAGGAGGGTTCAGCATGAGTTCCTCGAGGGGAAGCTGAGGGCCCTCATTCAGAAGgtGGAGTCTCACTGCGCAtgcgaccccccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU296881 True 284 TUCP 0.63 4 24055525 24056877

Neighbor

gene id symbol gene type direction distance location
LOC103041217 mat1a,LOC107582520,LOC107678534,LOC107733750,LOC107708460,LOC108263526,LOC105911600,LOC107570529 coding downstream 15157 24030874 ~ 24040368 (-)
slc25a16 slc25a16,LOC107678603,LOC107708451,LOC107747470 coding downstream 292721 23750134 ~ 23762804 (-)
alox5 alox5,alox5a,LOC107747471,LOC107708393,LOC107690200,LOC107582511,LOC107678516 coding downstream 312879 23723299 ~ 23742646 (-)
LOC111195939 fam21c,LOC107678570,LOC107589565 coding downstream 341167 23709285 ~ 23714358 (-)
washc2c NA coding downstream 347255 23693256 ~ 23708270 (-)
LOC103040609 LOC103040609,LOC108441766,LOC108263463,LOC107678536,LOC107708462,LOC107570532,LOC106577244 coding upstream 22990 24079867 ~ 24091509 (-)
lzts2 lzts2,lzts2a,LOC107733684,LOC107582523,LOC107708464,LOC107690159,LOC107570533 coding upstream 80945 24137822 ~ 24255139 (-)
LOC103038918 LOC108441763,LOC108263187 coding upstream 271206 24328083 ~ 24401465 (-)
LOC103039233 NA coding upstream 349030 24405907 ~ 24428299 (-)
dcaf10 dcaf10,wdr32,LOC107708468,LOC107678556,LOC107733687 coding upstream 390936 24447813 ~ 24457455 (-)
LOC111195998 NA non-coding downstream 403 24054267 ~ 24055122 (-)
G218779 zgc:154058,LOC103041715,LOC107582519,LOC107570530,LOC107708463,LOC107733751,LOC107678495,LOC108441772 non-coding downstream 29636 24022837 ~ 24025889 (-)
G218777 NA non-coding downstream 71009 23981181 ~ 23984516 (-)
G218765 NA non-coding downstream 108979 23946214 ~ 23946546 (-)
G218731 ccar1,LOC107678563 non-coding downstream 159711 23872841 ~ 23895814 (-)
G218793 NA non-coding upstream 14038 24070915 ~ 24073134 (-)
G218820 NA non-coding upstream 77308 24134185 ~ 24136995 (-)
G218829 NA non-coding upstream 110518 24167395 ~ 24170774 (-)
G218927 NA non-coding upstream 442796 24499673 ~ 24507296 (-)
G218929 NA non-coding upstream 452768 24509645 ~ 24509912 (-)
G218720 LOC108444338,LOC104946244,LOC101064687,LOC103387332 other downstream 198018 23850963 ~ 23857507 (-)
LOC103032322 eif4e1c,if4e,LOC103032634,LOC108444323,LOC107690176,LOC107582514,LOC103032322,LOC108444348 other downstream 205725 23835779 ~ 23849800 (-)
march8 march8 other downstream 398539 23454175 ~ 23656986 (-)
G218545 NA other downstream 1209320 22844833 ~ 22846205 (-)
G218329 eif5,LOC107589547 other downstream 1999032 22051889 ~ 22056493 (-)
LOC103045183 emx1,LOC103045183,LOC108441775,LOC108263581,LOC107567848,LOC107678523,LOC107733702,LOC107690190,LOC102233543,LOC103458176,LOC103150078,LOC107097582 other upstream 626360 24683237 ~ 24700649 (-)
LOC103046115 lrit3 other upstream 1161272 25218149 ~ 25226250 (-)
G219510 NA other upstream 2415751 26472628 ~ 26474247 (-)
zbtb18 zbtb18,LOC107666464,LOC107587843 other upstream 2681927 26738804 ~ 26757592 (-)
G219671 NA other upstream 2770151 26827028 ~ 26827527 (-)

Expression


Co-expression Network