G219050


Basic Information

Item Value
gene id G219050
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 24842302 ~ 24842533 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU297241
aaaagagctgttgagcattcagcatgagtctcacgggtcttccttcctcttccacgccacatttggtgtcagaagtgaccctgctggaagatattgagctgcTGGCAGGGGAAATCGAACGGCTGAGGAGGAAGACAGCGGACCAACGGACTAGAGGCAAGGCTCTCCAGCGGAGTGGACTCGGACCTGACGGCGCCAGCGGGCTGTTCGGAGGTCGTGGCCGGGGAGAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297241 True 232 TUCP 0.59 1 24842302 24842533

Neighbor

gene id symbol gene type direction distance location
ap5s1 ap5s1 coding upstream 43703 24794890 ~ 24798599 (+)
cdc25b cdc25b,LOC108417292 coding upstream 54962 24779609 ~ 24787340 (+)
LOC103045503 sfxn5,sfxn5a,LOC108262907 coding upstream 164189 24658431 ~ 24678113 (+)
LOC103044475 rab11fip5,LOC108263817 coding upstream 184654 24598605 ~ 24657648 (+)
LOC103046402 NA coding upstream 244787 24591088 ~ 24597515 (+)
rrh rrh,LOC107666394,LOC107585226,LOC107733708 coding downstream 342101 25184634 ~ 25192379 (+)
metap1 metap1,LOC107733733,LOC107556924,LOC107695030 coding downstream 383908 25226441 ~ 25241001 (+)
LOC103043156 eif4e,LOC107585229,LOC107747571,LOC108263665,LOC107556921,LOC103460523,LOC103354029 coding downstream 468310 25310843 ~ 25315607 (+)
LOC103042335 lingo2,lingo2b,LOC107666555,LOC107556920 coding downstream 497931 25340464 ~ 25406863 (+)
c25h9orf72 cunh9orf72,zgc:100846,c3h9orf72,LOC107556919,LOC107747573,LOC107733782,LOC107695028 coding downstream 574847 25417380 ~ 25430559 (+)
LOC111196006 NA non-coding upstream 49481 24790077 ~ 24792821 (+)
G218948 NA non-coding upstream 201255 24589310 ~ 24641047 (+)
G218920 NA non-coding upstream 271570 24567317 ~ 24570732 (+)
G218893 NA non-coding upstream 363080 24474824 ~ 24479222 (+)
G218853 pomk non-coding upstream 380993 24459393 ~ 24461309 (+)
G219067 NA non-coding downstream 104191 24946724 ~ 24947071 (+)
G219069 NA non-coding downstream 166608 25009141 ~ 25009529 (+)
G219074 NA non-coding downstream 198704 25041237 ~ 25041789 (+)
G219102 NA non-coding downstream 241924 25084457 ~ 25084856 (+)
G219141 NA non-coding downstream 291420 25133953 ~ 25138947 (+)
LOC103046104 LOC108441759 other upstream 375435 24443291 ~ 24466867 (+)
fam213a fam213a,fam213aa,LOC107690162,LOC107733773,LOC107582522 other upstream 770676 24064495 ~ 24071626 (+)
G218758 NA other upstream 778514 24059211 ~ 24063788 (+)
LOC103041715 zgc:154058,LOC103041715,LOC108441772,LOC107733751,LOC107690163,LOC107570530,LOC107582519,LOC103387327,LOC107708463,LOC108263524 other upstream 813321 23981135 ~ 24028981 (+)
G218651 NA other upstream 1134059 23696577 ~ 23708243 (+)
dapp1 dapp1,LOC107579178,LOC107556904,LOC107667071,LOC107585227,LOC107733757 other downstream 319194 25161727 ~ 25174708 (+)
G219171 cunh4orf32,c3h4orf32 other downstream 414417 25256950 ~ 25302587 (+)
LOC103047652 NA other downstream 596186 25438719 ~ 25442581 (+)
LOC111196018 NA other downstream 2357919 27200452 ~ 27236616 (+)
plekhh2 plekhh2 other downstream 3648313 28490846 ~ 28551769 (+)

Expression


Co-expression Network