G219074


Basic Information

Item Value
gene id G219074
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 25041237 ~ 25041789 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU297267
TCGCCTCCTCTCCGGCGCGCGCGACTGTGCGGCGGCTGTGCGACTCtgcgagcgagtgtgtgtgagtgagtgtatgaGACCGTGGTGGTGTTTTCTCCTGCATCCAGCTCCGCGTTATTTGGCTGCAGATAAGAAGAAGATGATTGAGGATTCTGTGCAGAACTATCGCCGGGTCTGGACTGCTGCTCGCCGCGCCTTCGTGTCGTTAAAGCGGCGCTAAGGAGTGCAGAAGcaggaaaattaaaataaaaaaataagaataaataattaattaattaataaaaaaacgtgTCCCGGACTGCATGCTGGAACTTTGAGACTACAGGCGGACGAGCAAGTGAGCAACTCGCTTAGGGCTTGATTTTTCCTTCTTTGTATCTACCTACATCtatatctctgtatctctggcGGGACTCATGGCTCTGATGCGCAGGATGGACCTGATCGGGCTCTCTCTGCTCCAGCTGGCTGTGCTCGGTGAGTCTCAAATCTTTCATCATCAGCTCCTCCGCTGCGCGCGGCCGGTACGCTGCTGTTGGCCGGCGCGGCCAGC

Function

GO: NA

KEGG:

id description
ko05032 Morphine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU297267 True 553 lncRNA 0.53 1 25041237 25041789

Neighbor

gene id symbol gene type direction distance location
ap5s1 ap5s1 coding upstream 242638 24794890 ~ 24798599 (+)
cdc25b cdc25b,LOC108417292 coding upstream 253897 24779609 ~ 24787340 (+)
LOC103045503 sfxn5,sfxn5a,LOC108262907 coding upstream 363124 24658431 ~ 24678113 (+)
LOC103044475 rab11fip5,LOC108263817 coding upstream 383589 24598605 ~ 24657648 (+)
LOC103046402 NA coding upstream 443722 24591088 ~ 24597515 (+)
rrh rrh,LOC107666394,LOC107585226,LOC107733708 coding downstream 142845 25184634 ~ 25192379 (+)
metap1 metap1,LOC107733733,LOC107556924,LOC107695030 coding downstream 184652 25226441 ~ 25241001 (+)
LOC103043156 eif4e,LOC107585229,LOC107747571,LOC108263665,LOC107556921,LOC103460523,LOC103354029 coding downstream 269054 25310843 ~ 25315607 (+)
LOC103042335 lingo2,lingo2b,LOC107666555,LOC107556920 coding downstream 298675 25340464 ~ 25406863 (+)
c25h9orf72 cunh9orf72,zgc:100846,c3h9orf72,LOC107556919,LOC107747573,LOC107733782,LOC107695028 coding downstream 375591 25417380 ~ 25430559 (+)
G219069 NA non-coding upstream 31708 25009141 ~ 25009529 (+)
G219067 NA non-coding upstream 94166 24946724 ~ 24947071 (+)
LOC111196006 NA non-coding upstream 248416 24790077 ~ 24792821 (+)
G218948 NA non-coding upstream 400190 24589310 ~ 24641047 (+)
G218920 NA non-coding upstream 470505 24567317 ~ 24570732 (+)
G219102 NA non-coding downstream 42668 25084457 ~ 25084856 (+)
G219141 NA non-coding downstream 92164 25133953 ~ 25138947 (+)
G219144 lamtor3,mk1i1 non-coding downstream 136864 25178653 ~ 25187678 (+)
G219150 NA non-coding downstream 151119 25192908 ~ 25194235 (+)
G219151 enpep non-coding downstream 152998 25194787 ~ 25198276 (+)
G219050 NA other upstream 198704 24842302 ~ 24842533 (+)
LOC103046104 LOC108441759 other upstream 574370 24443291 ~ 24466867 (+)
fam213a fam213a,fam213aa,LOC107690162,LOC107733773,LOC107582522 other upstream 969611 24064495 ~ 24071626 (+)
G218758 NA other upstream 977449 24059211 ~ 24063788 (+)
LOC103041715 zgc:154058,LOC103041715,LOC108441772,LOC107733751,LOC107690163,LOC107570530,LOC107582519,LOC103387327,LOC107708463,LOC108263524 other upstream 1012256 23981135 ~ 24028981 (+)
dapp1 dapp1,LOC107579178,LOC107556904,LOC107667071,LOC107585227,LOC107733757 other downstream 119938 25161727 ~ 25174708 (+)
G219171 cunh4orf32,c3h4orf32 other downstream 215161 25256950 ~ 25302587 (+)
LOC103047652 NA other downstream 396930 25438719 ~ 25442581 (+)
LOC111196018 NA other downstream 2158663 27200452 ~ 27236616 (+)
plekhh2 plekhh2 other downstream 3449057 28490846 ~ 28551769 (+)

Expression


Co-expression Network