G219102


Basic Information

Item Value
gene id G219102
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 25084457 ~ 25084856 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU297295
TGCTTTCGAGGAGGCGTCTGCTGGTATCCGTTCTCGCAGATTGGCTGTAGAGTTGGTATGATGGAGAGAGGCTGGATTTAACAATTCCAGCCATCGTAAGTTCTGTGGTGATGTCTGGATTTGGTACAGTTTCCTcaagacaaaatgttttcagagatacagccttagaggtaaaaatatacaggggttagacaatgaaactgaaacacctggttttagaccacaataatgtattgtcctgacggacagttctggtgaaaacaggacagttgagatgcacattgaattctgccgtgatttagGCAGTCGtgggtttatgttttttggataaaatccgggtttagcacccgaacatccctttcagacagcttcctcttgcgtccacagttattcctgttgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297295 True 400 lncRNA 0.44 1 25084457 25084856

Neighbor

gene id symbol gene type direction distance location
ap5s1 ap5s1 coding upstream 285858 24794890 ~ 24798599 (+)
cdc25b cdc25b,LOC108417292 coding upstream 297117 24779609 ~ 24787340 (+)
LOC103045503 sfxn5,sfxn5a,LOC108262907 coding upstream 406344 24658431 ~ 24678113 (+)
LOC103044475 rab11fip5,LOC108263817 coding upstream 426809 24598605 ~ 24657648 (+)
LOC103046402 NA coding upstream 486942 24591088 ~ 24597515 (+)
rrh rrh,LOC107666394,LOC107585226,LOC107733708 coding downstream 99778 25184634 ~ 25192379 (+)
metap1 metap1,LOC107733733,LOC107556924,LOC107695030 coding downstream 141585 25226441 ~ 25241001 (+)
LOC103043156 eif4e,LOC107585229,LOC107747571,LOC108263665,LOC107556921,LOC103460523,LOC103354029 coding downstream 225987 25310843 ~ 25315607 (+)
LOC103042335 lingo2,lingo2b,LOC107666555,LOC107556920 coding downstream 255608 25340464 ~ 25406863 (+)
c25h9orf72 cunh9orf72,zgc:100846,c3h9orf72,LOC107556919,LOC107747573,LOC107733782,LOC107695028 coding downstream 332524 25417380 ~ 25430559 (+)
G219074 NA non-coding upstream 42668 25041237 ~ 25041789 (+)
G219069 NA non-coding upstream 74928 25009141 ~ 25009529 (+)
G219067 NA non-coding upstream 137386 24946724 ~ 24947071 (+)
LOC111196006 NA non-coding upstream 291636 24790077 ~ 24792821 (+)
G218948 NA non-coding upstream 443410 24589310 ~ 24641047 (+)
G219141 NA non-coding downstream 49097 25133953 ~ 25138947 (+)
G219144 lamtor3,mk1i1 non-coding downstream 93797 25178653 ~ 25187678 (+)
G219150 NA non-coding downstream 108052 25192908 ~ 25194235 (+)
G219151 enpep non-coding downstream 109931 25194787 ~ 25198276 (+)
G219153 NA non-coding downstream 119178 25204034 ~ 25208010 (+)
G219050 NA other upstream 241924 24842302 ~ 24842533 (+)
LOC103046104 LOC108441759 other upstream 617590 24443291 ~ 24466867 (+)
fam213a fam213a,fam213aa,LOC107690162,LOC107733773,LOC107582522 other upstream 1012831 24064495 ~ 24071626 (+)
G218758 NA other upstream 1020669 24059211 ~ 24063788 (+)
LOC103041715 zgc:154058,LOC103041715,LOC108441772,LOC107733751,LOC107690163,LOC107570530,LOC107582519,LOC103387327,LOC107708463,LOC108263524 other upstream 1055476 23981135 ~ 24028981 (+)
dapp1 dapp1,LOC107579178,LOC107556904,LOC107667071,LOC107585227,LOC107733757 other downstream 76871 25161727 ~ 25174708 (+)
G219171 cunh4orf32,c3h4orf32 other downstream 172094 25256950 ~ 25302587 (+)
LOC103047652 NA other downstream 353863 25438719 ~ 25442581 (+)
LOC111196018 NA other downstream 2115596 27200452 ~ 27236616 (+)
plekhh2 plekhh2 other downstream 3405990 28490846 ~ 28551769 (+)

Expression


Co-expression Network