G219374


Basic Information

Item Value
gene id G219374
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 25947009 ~ 25947344 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU297675
CATTGGTGGCGCtattatactcctgaatatataaaacctatgtggatgtataaaagactttttaaattttaatttaaaagctgtttgaccagtggtaggatggtccccccttaaatgtgagtcttggtcctcccaaggtttcttcctcctcctgcagctctgagggagtttttccttgcctctgcgctcactgggggttctgtattctgtattttctatgtttaatgttttgcctgattctttgtcctgtgatcatgtttctgtaaagctgctttgtgccaacacctgttgtaaaaagcgctatacaaataaatttgatttgatttgatttgatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297675 True 336 lncRNA 0.39 1 25947009 25947344

Neighbor

gene id symbol gene type direction distance location
letm1 letm1,LOC107556916 coding upstream 262998 25642553 ~ 25684011 (+)
kiaa1109 kiaa1109 coding upstream 334825 25533591 ~ 25612184 (+)
LOC103041526 NA coding upstream 509737 25431246 ~ 25437272 (+)
c25h9orf72 cunh9orf72,zgc:100846,c3h9orf72,LOC107556919,LOC107747573,LOC107733782,LOC107695028 coding upstream 516450 25417380 ~ 25430559 (+)
LOC103042335 lingo2,lingo2b,LOC107666555,LOC107556920 coding upstream 540146 25340464 ~ 25406863 (+)
LOC103023829 foxi3 coding downstream 66979 26014323 ~ 26018552 (+)
LOC103044529 LOC103044529 coding downstream 133485 26080829 ~ 26086150 (+)
c25h20orf194 cunh20orf194,c3h20orf194 coding downstream 142639 26089983 ~ 26125612 (+)
slc4a11 slc4a11,LOC107747581 coding downstream 196013 26143357 ~ 26269695 (+)
LOC103042087 rpia,LOC107671341,LOC107695020 coding downstream 326495 26273839 ~ 26284115 (+)
G219367 NA non-coding upstream 46140 25900643 ~ 25900869 (+)
G219286 NA non-coding upstream 139990 25747231 ~ 25807019 (+)
G219282 NA non-coding upstream 254492 25632476 ~ 25692517 (+)
G219271 NA non-coding upstream 501510 25445271 ~ 25445499 (+)
LOC111196009 NA non-coding upstream 549837 25395800 ~ 25397172 (+)
G219404 NA non-coding downstream 254885 26202229 ~ 26204872 (+)
G219416 NA non-coding downstream 439569 26386913 ~ 26387761 (+)
G219410 NA non-coding downstream 515364 26462708 ~ 26474304 (+)
G219432 NA non-coding downstream 716077 26663421 ~ 26663641 (+)
G219433 desi2,LOC107587845,LOC107747542,LOC107733777,LOC107666556,LOC107089908 non-coding downstream 720707 26668051 ~ 26684245 (+)
LOC103047652 NA other upstream 504428 25438719 ~ 25442581 (+)
G219171 cunh4orf32,c3h4orf32 other upstream 644422 25256950 ~ 25302587 (+)
dapp1 dapp1,LOC107579178,LOC107556904,LOC107667071,LOC107585227,LOC107733757 other upstream 772301 25161727 ~ 25174708 (+)
G219050 NA other upstream 1104476 24842302 ~ 24842533 (+)
LOC103046104 LOC108441759 other upstream 1480142 24443291 ~ 24466867 (+)
LOC111196018 NA other downstream 1253108 27200452 ~ 27236616 (+)
plekhh2 plekhh2 other downstream 2543502 28490846 ~ 28551769 (+)
G220074 NA other downstream 2771912 28719256 ~ 28720661 (+)
G220194 NA other downstream 3194023 29141367 ~ 29142018 (+)
LOC103047316 NA other downstream 3688717 29636061 ~ 29640401 (+)

Expression


Co-expression Network