G219488 (eif2ak3)


Basic Information

Item Value
gene id G219488
gene name eif2ak3
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 26286282 ~ 26306762 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU297824
CTAGATGACACCAGGCAGCCAGAGCCCACGTCCAGGTCCCACTGTTTCCTCCCCTGATTCAGAGGGTCGAGAGCAGCAATCCGTCCATCTAGAGTGCTGATGATCACCAGGCTCCTTCTGTTGTGAGGGAAGTTTGAGTCGCTCTCTCCAGACgtttcctctccctctcctccaGTCGCCCCGTTCTCGTCCTCCACTGTCACGTCCCCCGTTCCTCCCGGAGCCCCTGAGCTCTCCAGCCGCTCCATAACGGCTCCATCTCCTGCTGCCGGGGCCTCCAGCTTTCTCCCGGAGAGGGAGTTGGTTTGTAAAGTCCCGGTTACCCCTCTCAAGATCAACAACAGCACAAGGGATATGCCCGCGATTCCAAACCGAAGCCCCCTTTCCATTGGGACAAGTGGCACATTAGCTAGTATGTTAGATAGGCAATCCCATCCATACGAAAAACAAAATGCAAAGctagtttttttaaaacagcttccctgaaaaaaaaaagctctgaaaCGATTTATACTAATAAAGGACGCAATTAACAAGCTTCCCTGCGACTTTCAGATCTCTTTTCTTAGCGTAAACACGAGTCTCTGTAGCA

Function

symbol description
eif2ak3 Predicted to enable eukaryotic translation initiation factor 2alpha kinase activity. Acts upstream of or within response to endoplasmic reticulum stress and response to hypoxia. Predicted to be located in endoplasmic reticulum membrane. Predicted to be active in cytosol. Is expressed in brain and liver. Human ortholog(s) of this gene implicated in Wolcott-Rallison syndrome and type 1 diabetes mellitus. Orthologous to human EIF2AK3 (eukaryotic translation initiation factor 2 alpha kinase 3).

NR:

description
PREDICTED: eukaryotic translation initiation factor 2-alpha kinase 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297824 True 592 lncRNA 0.52 2 26286282 26306762

Neighbor

gene id symbol gene type direction distance location
LOC103044048 NA coding downstream 147109 26127628 ~ 26139173 (-)
fgfr3 fgfr3 coding downstream 457636 25750867 ~ 25828646 (-)
nsd2 whsc1,LOC103458261 coding downstream 646051 25624647 ~ 25640231 (-)
LOC103022475 NA coding downstream 663180 25617911 ~ 25623102 (-)
fam241a LOC107695033,LOC107585232,LOC107733699 coding downstream 977009 25299220 ~ 25309273 (-)
gfra4 gfra4,gfra4a,LOC107747595,LOC107693311,LOC107568637,LOC107695017,LOC107733662 coding upstream 182962 26489724 ~ 26541157 (-)
desi2 desi2,LOC107587845,LOC107747542,LOC107733777,LOC107666556,LOC107089908 coding upstream 361180 26667942 ~ 26684762 (-)
sdccag8 sdccag8 coding upstream 680431 26987193 ~ 27092128 (-)
LOC103024887 dync2li1 coding upstream 885270 27192032 ~ 27198625 (-)
LOC111196017 LOC108435962,LOC108426032 coding upstream 933709 27240471 ~ 27242080 (-)
G219472 rpia,LOC107733738,LOC107695020,LOC107568642 non-coding downstream 7514 26227869 ~ 26278768 (-)
G219474 NA non-coding downstream 16123 26257382 ~ 26270159 (-)
G219460 NA non-coding downstream 142691 26143354 ~ 26143591 (-)
G219448 NA non-coding downstream 160670 26043206 ~ 26125612 (-)
G219450 LOC103044529 non-coding downstream 200217 26062604 ~ 26086065 (-)
G219544 NA non-coding upstream 323910 26630672 ~ 26648411 (-)
G219543 NA non-coding upstream 341752 26648514 ~ 26653244 (-)
G219550 NA non-coding upstream 347955 26654717 ~ 26654969 (-)
G219666 NA non-coding upstream 489490 26796252 ~ 26796721 (-)
G219669 NA non-coding upstream 492644 26799406 ~ 26799852 (-)
LOC103046115 lrit3 other downstream 1060032 25218149 ~ 25226250 (-)
LOC103045183 emx1,LOC103045183,LOC108441775,LOC108263581,LOC107567848,LOC107678523,LOC107733702,LOC107690190,LOC102233543,LOC103458176,LOC103150078,LOC107097582 other downstream 1585633 24683237 ~ 24700649 (-)
G218781 NA other downstream 2229405 24055525 ~ 24056877 (-)
G218720 LOC108444338,LOC104946244,LOC101064687,LOC103387332 other downstream 2428775 23850963 ~ 23857507 (-)
LOC103032322 eif4e1c,if4e,LOC103032634,LOC108444323,LOC107690176,LOC107582514,LOC103032322,LOC108444348 other downstream 2436482 23835779 ~ 23849800 (-)
G219510 NA other upstream 165866 26472628 ~ 26474247 (-)
zbtb18 zbtb18,LOC107666464,LOC107587843 other upstream 432042 26738804 ~ 26757592 (-)
G219671 NA other upstream 520266 26827028 ~ 26827527 (-)
epas1 epas1,epas1a,LOC102794480,LOC108430450,LOC107739260 other upstream 1808164 28114926 ~ 28302444 (-)
G220285 NA other upstream 3253297 29560059 ~ 29563970 (-)

Expression


Co-expression Network