G219510


Basic Information

Item Value
gene id G219510
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 26472628 ~ 26474247 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU297852
ATAATTACAACTTCAGTTATAATTCTCGAGAGACcgtaatttttttcttcttcttttttcacaCATCTCAGTTGTGCTTAATTTAAGGTTTGTTTGTGGTGACATTCCCCATGTTACATACAAAAAGAAACTGCGGTGAGCTCCCACTGTAAAAGCCTGGGGACGCTGCACCTGCCAAGCAAGTCATTCAGAAACAGAAAGGGCATTCACATTACTGTCCATcattatgtacaaaaaaaaaagagcgcaTCTGCAGCTACATTATACATATTAACAAACTACAGATCTCAGTATCTACAGTGATCGCTGTACAGAGAAGTGATGCCGGGGACGGGGTGCGGGTGTACGATGAGGGAGGAGGAGTTCTGTTTGAGGCTTTTGAAACGTAAATGAACATTCGTTTTCAATTGGCGTCCACACTAAGAGACCAGCTCCTTGGATAACGGTGCTCCACCCCAtgttggtgtgtatgtgtgagtgtgtgtgttactgtagtGCTCTTCATATCTCATGGCGTAGTGCCTCCTACTGAGCAGCTGCAGCTGAAAAGGGCGGATTCTCACTCGGGCCGTCGTCGGTAGCTGCCGTGCTGTTGGTGCTACTTCTCCCGGTTTTAATGTAGCTTCACATTTGATCCATAAACCTGAAAGGCAATTTCCCGCCGTAATCACACATCACTCTGGACCCCGGTGTGATTTAGCTGCGGTGGGTCTCGTTCGGTGGCGAGAGCTCTGACGGAATGCACTGTGATGTTTGTGAATGCTCTGTGTCACCTCAATCATGGCTCATACAGCTCCTATCACAGGGAAACTGACAGGCGGGCAACGGCAGACACATAAACCCAATCTCAATTCTACCCATAAAGCTTGGCACACTATGAACATGATATACTGTAAACCTCACCGTGACTGTGGGAATGAAACCCATATGgaacgaaagaaaaaaaaatggaggatGGAAAGCTATACTTTTGCACGGTGTGTTTGTGGGTCTAAATGGAGTAGCAGGGTAGAATATACTGAGATGGAAAAACGTTACATGAAAAAGAAAAGTGAGGGTTTATACGCAGGCATTGACTTTACAACATTACCAAAACTATACAATGCTTCAAACTGGAATGTGCATGAACTGtatcaaaaataacaaaagattaTTTTAAGCCCCATTCAGATGggattattttttctaattttctcttttatgggggatcctctttgattttaccgcATGTATGTTTTCCtaagacgtcctctgagaaaattacaggctgactTATCTACTGTTATCTACTGAACCCCGTCGTCACCTCACGTttcataaaatagctatttgtccactgccacgcacggGCATGGGCACgcatttccatggagatccatgtaaacacaacagtgagtggaaatggaggagctactgaacgcgatgtcatgtgaccgagaaataaaaaaaaacttcaattgGAGTTTGAacgcaagagttttatcactaaactAATTACTAATCCTGTCCTGATAGGGCTAACGATCCCATTTTAACCccataaaaatacaaacaaatatagcTGCTGTCCATTGAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU297852 True 1579 TUCP 0.43 2 26472628 26474247

Neighbor

gene id symbol gene type direction distance location
LOC103044048 NA coding downstream 333455 26127628 ~ 26139173 (-)
fgfr3 fgfr3 coding downstream 643982 25750867 ~ 25828646 (-)
nsd2 whsc1,LOC103458261 coding downstream 832397 25624647 ~ 25640231 (-)
LOC103022475 NA coding downstream 849526 25617911 ~ 25623102 (-)
fam241a LOC107695033,LOC107585232,LOC107733699 coding downstream 1163355 25299220 ~ 25309273 (-)
gfra4 gfra4,gfra4a,LOC107747595,LOC107693311,LOC107568637,LOC107695017,LOC107733662 coding upstream 15477 26489724 ~ 26541157 (-)
desi2 desi2,LOC107587845,LOC107747542,LOC107733777,LOC107666556,LOC107089908 coding upstream 193695 26667942 ~ 26684762 (-)
sdccag8 sdccag8 coding upstream 512946 26987193 ~ 27092128 (-)
LOC103024887 dync2li1 coding upstream 717785 27192032 ~ 27198625 (-)
LOC111196017 LOC108435962,LOC108426032 coding upstream 766224 27240471 ~ 27242080 (-)
G219471 NA non-coding downstream 163452 26282460 ~ 26309176 (-)
G219488 eif2ak3 non-coding downstream 165866 26286282 ~ 26306762 (-)
G219472 rpia,LOC107733738,LOC107695020,LOC107568642 non-coding downstream 193860 26227869 ~ 26278768 (-)
G219474 NA non-coding downstream 202469 26257382 ~ 26270159 (-)
G219460 NA non-coding downstream 329037 26143354 ~ 26143591 (-)
G219544 NA non-coding upstream 156425 26630672 ~ 26648411 (-)
G219543 NA non-coding upstream 174267 26648514 ~ 26653244 (-)
G219550 NA non-coding upstream 180470 26654717 ~ 26654969 (-)
G219666 NA non-coding upstream 322005 26796252 ~ 26796721 (-)
G219669 NA non-coding upstream 325159 26799406 ~ 26799852 (-)
LOC103046115 lrit3 other downstream 1246378 25218149 ~ 25226250 (-)
LOC103045183 emx1,LOC103045183,LOC108441775,LOC108263581,LOC107567848,LOC107678523,LOC107733702,LOC107690190,LOC102233543,LOC103458176,LOC103150078,LOC107097582 other downstream 1771979 24683237 ~ 24700649 (-)
G218781 NA other downstream 2415751 24055525 ~ 24056877 (-)
G218720 LOC108444338,LOC104946244,LOC101064687,LOC103387332 other downstream 2615121 23850963 ~ 23857507 (-)
LOC103032322 eif4e1c,if4e,LOC103032634,LOC108444323,LOC107690176,LOC107582514,LOC103032322,LOC108444348 other downstream 2622828 23835779 ~ 23849800 (-)
zbtb18 zbtb18,LOC107666464,LOC107587843 other upstream 264557 26738804 ~ 26757592 (-)
G219671 NA other upstream 352781 26827028 ~ 26827527 (-)
epas1 epas1,epas1a,LOC102794480,LOC108430450,LOC107739260 other upstream 1640679 28114926 ~ 28302444 (-)
G220285 NA other upstream 3085812 29560059 ~ 29563970 (-)
G220313 NA other upstream 3169894 29644141 ~ 29644434 (-)

Expression


Co-expression Network