G220074


Basic Information

Item Value
gene id G220074
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 28719256 ~ 28720661 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU298587
CTGGATATGGGGCAGGACAGGGGATGGGAAATGAGActgaacaggggactggacagTGGGCataaacggagactggacattgggcTGGACAGGGGATACAGACTGGGACTGGAATGGAGACTGGGGAGGTGGGAAAAGCAGAGACCGGACAGGGGACgagaactgagactggacagagggctgtacATCGGGCAGGGATGCAGACAGGGCAGGGGACatgaacaaagactggacaggggacggagactggacgaaagactggacagggggttgGACGTTAGActgggacagagactggactgtGGACGAGAGAACCGGGACAAATACACTTACAGGGACAGAAACTAGCACAGTGACTGGGACAGGAACAAAAAAACCTAAGGGGACAGGAACATGAACGAACACAGAtacggggaccaggacagggagagacagggggaccAAAAACATAGGAGGGTGCCCAGGACCagcaaaagtctgtggggactttaggcctcggggattccaacgccggggtcccgcatggTGCATGGCGGATCGCCAACCTGGAGCCGGTCCACTTGTTTGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
ko00590 Arachidonic acid metabolism
ko00591 Linoleic acid metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU298587 True 568 TUCP 0.57 2 28719256 28720661

Neighbor

gene id symbol gene type direction distance location
stpg4 NA coding upstream 87498 28624270 ~ 28631758 (+)
LOC103028596 calm1,LOC102778633,LOC102293206,LOC107396020,LOC105896953,LOC107668515 coding upstream 98025 28616054 ~ 28621231 (+)
LOC103033108 LOC108420482 coding upstream 111343 28578656 ~ 28607913 (+)
six3 six3,six3a,LOC107733790 coding upstream 875015 27840844 ~ 27844241 (+)
camkmt camkmt,si:ch73-54n14.2,LOC107585255,LOC107733780,LOC107602502,LOC107666367 coding upstream 1007537 27510214 ~ 27711719 (+)
mcfd2 mcfd2 coding downstream 15098 28735759 ~ 28741543 (+)
LOC107197786 thada,LOC104958480 coding downstream 153359 28874020 ~ 29005591 (+)
zfp36l2 zfp36l2 coding downstream 287975 29008636 ~ 29012667 (+)
haao haao,LOC107727361,LOC107586504,LOC107699283,LOC107590002,LOC107707146 coding downstream 749680 29470341 ~ 29483040 (+)
LOC103023539 LOC103023539 coding downstream 780345 29501006 ~ 29502519 (+)
G220032 LOC108422531 non-coding upstream 151224 28565015 ~ 28568032 (+)
G219914 NA non-coding upstream 494644 28219695 ~ 28224612 (+)
G219917 NA non-coding upstream 533831 28182861 ~ 28185425 (+)
G219896 NA non-coding upstream 771161 27947861 ~ 27948095 (+)
G219891 NA non-coding upstream 790517 27928534 ~ 27928739 (+)
G220094 NA non-coding downstream 123809 28844470 ~ 28860775 (+)
LOC107197787 NA non-coding downstream 383111 29103772 ~ 29113662 (+)
G220209 NA non-coding downstream 575426 29296087 ~ 29296359 (+)
G220227 NA non-coding downstream 690886 29411547 ~ 29420180 (+)
G220236 NA non-coding downstream 719365 29440026 ~ 29440318 (+)
plekhh2 plekhh2 other upstream 167487 28490846 ~ 28551769 (+)
LOC111196018 NA other upstream 1482640 27200452 ~ 27236616 (+)
LOC103047652 NA other upstream 3276675 25438719 ~ 25442581 (+)
G219171 cunh4orf32,c3h4orf32 other upstream 3416669 25256950 ~ 25302587 (+)
dapp1 dapp1,LOC107579178,LOC107556904,LOC107667071,LOC107585227,LOC107733757 other upstream 3544548 25161727 ~ 25174708 (+)
G220194 NA other downstream 420706 29141367 ~ 29142018 (+)
LOC103047316 NA other downstream 915400 29636061 ~ 29640401 (+)
G220336 NA other downstream 1067278 29787939 ~ 29793496 (+)
G220610 NA other downstream 2228351 30949012 ~ 30951941 (+)
G220800 NA other downstream 3016236 31736897 ~ 31738196 (+)

Expression


Co-expression Network