G220851


Basic Information

Item Value
gene id G220851
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 32097084 ~ 32097352 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU299632
CGGGTCCGTGAGCGCGCCGGATTAATGGCGGGTTGCCGGATGGCTGCTTGTCTGGACTGGACTCTATCTCTACCACCCCTTAACCCACATGTTGCCAGAACTGTCTATTGTCTGTGTATTGCATATGTGCTGAGGTTTTTTTTATGGTCCCATACTGTGCTTCCTTAGGAGCACAGTATGGggtatgctgtttttttttctcctctcctttCCCATTGTACCCCTCTTAATTTCCTATTCTCTGTCTTCCTGTCatgtaaccccccccc

Function

GO: NA

KEGG:

id description
ko01040 Biosynthesis of unsaturated fatty acids

RNA

RNA id representative length rna type GC content exon number start site end site
TU299632 True 269 lncRNA 0.49 1 32097084 32097352

Neighbor

gene id symbol gene type direction distance location
c1d c1d coding upstream 571741 31522285 ~ 31525343 (+)
psap psap coding upstream 641254 31443031 ~ 31455830 (+)
mrps6 mrps6 coding upstream 660555 31430280 ~ 31436529 (+)
trnak-cuu_13 NA coding upstream 668772 31428240 ~ 31428312 (+)
trnag-gcc_5 NA coding upstream 674262 31422752 ~ 31422822 (+)
ntpcr ntpcr coding downstream 192500 32289852 ~ 32296881 (+)
golga4 NA coding downstream 624753 32722105 ~ 32776771 (+)
itga9 itga9,LOC107679186,LOC107688464 coding downstream 682192 32779544 ~ 32905463 (+)
LOC111196032 NA coding downstream 814429 32911781 ~ 32921578 (+)
fbln7 fbln7,LOC107679196,LOC107754577,LOC107688955,LOC107733340,LOC107585467 coding downstream 849064 32946416 ~ 32973568 (+)
G220830 NA non-coding upstream 73183 31990028 ~ 32023901 (+)
G220828 meis1,LOC108423396,LOC107582672,LOC107717834 non-coding upstream 136784 31953861 ~ 31960300 (+)
G220802 NA non-coding upstream 350195 31745630 ~ 31746889 (+)
G220795 NA non-coding upstream 445160 31650913 ~ 31651924 (+)
G220788 NA non-coding upstream 493759 31603058 ~ 31603325 (+)
G220859 NA non-coding downstream 87601 32184953 ~ 32187166 (+)
G220862 NA non-coding downstream 133558 32230910 ~ 32237552 (+)
G220879 NA non-coding downstream 201980 32299332 ~ 32299534 (+)
G220881 NA non-coding downstream 205249 32302601 ~ 32303879 (+)
G220882 NA non-coding downstream 206943 32304295 ~ 32305661 (+)
G220800 NA other upstream 358888 31736897 ~ 31738196 (+)
G220610 NA other upstream 1145143 30949012 ~ 30951941 (+)
G220336 NA other upstream 2303588 29787939 ~ 29793496 (+)
LOC103047316 NA other upstream 2456683 29636061 ~ 29640401 (+)
G220194 NA other upstream 2955066 29141367 ~ 29142018 (+)
map10 NA other downstream 187225 32284577 ~ 32288850 (+)
LOC103027057 fbxo11a,msh6,LOC108413220,LOC107725019,LOC107588452,LOC107679165,LOC107733352,LOC108430631 other downstream 405422 32502774 ~ 32578552 (+)
LOC103038412 LOC108430255,LOC107679129,LOC107585442,LOC107688640 other downstream 516122 32613474 ~ 32677285 (+)
bcl2l11 bcl2l11 other downstream 1116276 33213628 ~ 33232791 (+)
G221292 NA other downstream 1346765 33444117 ~ 33444721 (+)

Expression


Co-expression Network