G220894


Basic Information

Item Value
gene id G220894
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 32344777 ~ 32391273 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU299693
ttagtccagtactatcagcactgcactggcttccagtcaaattccgcatagactataaaattctcctgttaacgtataaagccctacacggactcgctcctgagtatttacaagacctcatctcctgttatgaaccaccgcgattacttagatctcagggtgctggtttcttagtagttcctaaaattcagaggagctctgcaggaggaagagctttctcttataaagcgcctcaactctggaataatctccccgaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU299693 True 258 lncRNA 0.44 2 32344777 32391273

Neighbor

gene id symbol gene type direction distance location
ntpcr ntpcr coding upstream 47896 32289852 ~ 32296881 (+)
c1d c1d coding upstream 819434 31522285 ~ 31525343 (+)
psap psap coding upstream 888947 31443031 ~ 31455830 (+)
mrps6 mrps6 coding upstream 908248 31430280 ~ 31436529 (+)
trnak-cuu_13 NA coding upstream 916465 31428240 ~ 31428312 (+)
golga4 NA coding downstream 330832 32722105 ~ 32776771 (+)
itga9 itga9,LOC107679186,LOC107688464 coding downstream 388271 32779544 ~ 32905463 (+)
LOC111196032 NA coding downstream 520508 32911781 ~ 32921578 (+)
fbln7 fbln7,LOC107679196,LOC107754577,LOC107688955,LOC107733340,LOC107585467 coding downstream 555143 32946416 ~ 32973568 (+)
acoxl acoxl coding downstream 718686 33109959 ~ 33210737 (+)
G220891 NA non-coding upstream 4485 32339025 ~ 32340292 (+)
G220882 NA non-coding upstream 39116 32304295 ~ 32305661 (+)
G220881 NA non-coding upstream 40898 32302601 ~ 32303879 (+)
G220879 NA non-coding upstream 45243 32299332 ~ 32299534 (+)
G220862 NA non-coding upstream 107225 32230910 ~ 32237552 (+)
G220916 NA non-coding downstream 70158 32461431 ~ 32462921 (+)
G220919 NA non-coding downstream 100450 32491723 ~ 32492005 (+)
G220924 NA non-coding downstream 103665 32494938 ~ 32495315 (+)
G220926 NA non-coding downstream 194070 32585343 ~ 32585633 (+)
G220940 NA non-coding downstream 293966 32685239 ~ 32685607 (+)
map10 NA other upstream 55927 32284577 ~ 32288850 (+)
G220800 NA other upstream 606581 31736897 ~ 31738196 (+)
G220610 NA other upstream 1392836 30949012 ~ 30951941 (+)
G220336 NA other upstream 2551281 29787939 ~ 29793496 (+)
LOC103047316 NA other upstream 2704376 29636061 ~ 29640401 (+)
LOC103027057 fbxo11a,msh6,LOC108413220,LOC107725019,LOC107588452,LOC107679165,LOC107733352,LOC108430631 other downstream 111501 32502774 ~ 32578552 (+)
LOC103038412 LOC108430255,LOC107679129,LOC107585442,LOC107688640 other downstream 222201 32613474 ~ 32677285 (+)
bcl2l11 bcl2l11 other downstream 822355 33213628 ~ 33232791 (+)
G221292 NA other downstream 1052844 33444117 ~ 33444721 (+)
G221390 ate1 other downstream 1771308 34162581 ~ 34183237 (+)

Expression


Co-expression Network