G221292


Basic Information

Item Value
gene id G221292
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 33444117 ~ 33444721 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU300211
agtaaaattgaaaacattcgggataaaattaaacagataaatattacatcctctctgtcatctggtctggctgatctagaacaaaaccctgttactaaagttaggttggaagtctttaacccacttccacagctagaactagagaaaattatctcctcttcaaacagcacaacctgcacacttgatgctgttcccacaaaattattaaaacaggtactgccagatataattaaacctctgttaatgatagtaaactcatcgctcaccctgggccatgtacccaaagcctttaaaacagctgtaattaaacctctgatcaagaaaccaaatcttgatcctagtgtactgtctaactatagacctatttcaaacttaccatttatttctaagattttagaaaaagctgtagcccaacaactttgctcttacctgcaaagaaaccagatctatgaaaaatttcaatctggatttaggccttatcatagcactgagacagctttagttagaataacaaacgatctacttatagccgccgaccaaggctgtgtttccctactcgtacttctcgatctgagcgcagcctttgatacaatagatcatactat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU300211 True 605 TUCP 0.37 1 33444117 33444721

Neighbor

gene id symbol gene type direction distance location
acoxl acoxl coding upstream 233380 33109959 ~ 33210737 (+)
fbln7 fbln7,LOC107679196,LOC107754577,LOC107688955,LOC107733340,LOC107585467 coding upstream 470549 32946416 ~ 32973568 (+)
LOC111196032 NA coding upstream 522539 32911781 ~ 32921578 (+)
itga9 itga9,LOC107679186,LOC107688464 coding upstream 538654 32779544 ~ 32905463 (+)
golga4 NA coding upstream 667346 32722105 ~ 32776771 (+)
LOC103021727 vip,LOC107585469,LOC108262931,LOC107655780 coding downstream 10055 33454776 ~ 33458782 (+)
LOC103021397 NA coding downstream 1349362 34794083 ~ 34829457 (+)
l2hgdh l2hgdh coding downstream 1399773 34844494 ~ 34858483 (+)
sos2 sos2,LOC107654947 coding downstream 1418417 34863138 ~ 34892584 (+)
cdkn3 cdkn3 coding downstream 1481563 34926284 ~ 34932635 (+)
G221259 NA non-coding upstream 20918 33352741 ~ 33423199 (+)
LOC111196033 NA non-coding upstream 69649 33371506 ~ 33374468 (+)
G221217 NA non-coding upstream 131514 33290534 ~ 33312603 (+)
G221216 NA non-coding upstream 154244 33287419 ~ 33289873 (+)
G221198 NA non-coding upstream 193747 33246592 ~ 33250370 (+)
G221298 NA non-coding downstream 18463 33463184 ~ 33463392 (+)
G221308 NA non-coding downstream 48188 33492909 ~ 33494218 (+)
G221315 NA non-coding downstream 70931 33515652 ~ 33516194 (+)
G221321 NA non-coding downstream 184725 33629446 ~ 33629680 (+)
G221324 NA non-coding downstream 187365 33632086 ~ 33636648 (+)
bcl2l11 bcl2l11 other upstream 211326 33213628 ~ 33232791 (+)
LOC103038412 LOC108430255,LOC107679129,LOC107585442,LOC107688640 other upstream 766832 32613474 ~ 32677285 (+)
LOC103027057 fbxo11a,msh6,LOC108413220,LOC107725019,LOC107588452,LOC107679165,LOC107733352,LOC108430631 other upstream 865565 32502774 ~ 32578552 (+)
map10 NA other upstream 1155267 32284577 ~ 32288850 (+)
G220800 NA other upstream 1705921 31736897 ~ 31738196 (+)
G221390 ate1 other downstream 717860 34162581 ~ 34183237 (+)
synj2bp synj2bp,LOC108411060 other downstream 1542278 34986999 ~ 34997044 (+)
srsf5 srsf5,srsf5a,LOC107553206,LOC107736490,LOC108411053,LOC107602962 other downstream 1573721 35018442 ~ 35025598 (+)
LOC103031497 NA other downstream 1763710 35208431 ~ 35218378 (+)
gclc gclc,LOC107597697,LOC107664701,LOC107712340,LOC107688787 other downstream 2425297 35870018 ~ 35888815 (+)

Expression


Co-expression Network