CI01000009_00094836_00095813


Basic Information

Item Value
gene id CI01000009_00094836_00095813
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 94371 ~ 97230 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000009_00094836_00095813.mRNA
GTATATAACATTGGTTTGTTTGTACATGGTTCAGTACCATAATATCATGGTTAAACATGACACAATGTCAATGCTGCTGTATGTTTATCATGGTATTACTGTACAATTGTCATTTGGTAATACCGCCATAGTTTTTTGACAGCTCATTGGCTCATCTTTTTGTTCAGCACGAATTTGATTCTACTGAGATTTTGTTCAGGCAAATTTTGAACATTGAATGATACATCTCGTTCATGAAGAAACATGTTGTTTAGTTTGTCATGTGAATCGGTTGTGTAAATGATTCAGTGACTCTTTCATAACAAGCATAATGCCATTCGACTTTTTTGAATAAGTTGAACAAATCTTTTTGGCAAATCAATTCAAAAGATTTGATTTATACATTTAATATACAAGGTAATCTAAAACGGTCACTTCTGTGTATTTGTTTTTGAGAAGCAACAGAAAGTATTGGCAGGCCTGGAAATGAATTCAACTGACTGTCCTCCCATTGATGAATACATAAAAAGTTATTATCTGCCAGTGATGTATGGCATCATTTCTGTAGTTGGATTTGTGGGAAACTTCCTGGCAGTCATCATTTACCTGGCAAAGCTCCGACCATGGAAGAGCAGCAGCATTATAATGGTGAACTTGGCAGTAGCTGATCTGCTGTATGCTTTGAGTTTACCTATGCTGGTCCAATTTTACATTACCAGAAACTGGACTTTGGGGGAGTTCATGTGTCGTTTCATTCGCTTCTGCTTCTACTACAACCTCTACGGCAGCATCCTCTTCCTCACCTGCCTCAGCATCTTCCGTTACGTCGCAGTGGTGCATCCGCTGAAGGCTGCTGAGATCCGGAGGAAAAGATGGGGCATCTTGGCTTGTCTGACCGTCTGGGCCATTTCGCTAGTGGAGATCGCCCCAATGCTGGGGATGATTACTATACTGCAAAAGGACAACATGACACAATGCGTTGACTTCGCCAGTAATGATCCACTGGTGGTGTGGTGGTACGGTTGGATACTCACCGTGTTTGGATATATATTGCCATTGCTGGTGGTGTGCTGGAGCTACACTCGCATTGCAGGTGCTCTGGGGAGCAGCATATCCAGAAACAGGCCGAGTCGTTCTCGAGTTCGCATGCTTTCCATTTTGACTCTAGTGGTGTTTGTGGTGTGCTTCTTGCCATTTCATATCATGCGTGTACTGAGAGTGGATAGCCTGCGCGGCGCTGGTGTGCCGTGCATGCAGAGGAGAGGCATCCATGCAGCCTACATCTTATCACGACCCCTGGCGGGCCTCAACACCTTCTTCAACCTAGCGCTTTATACACTGGCTGGAGACAAGTTTCAACAGGCTTTCTGGAGCTTTGTGCACAGGAGGGAACGTACGAGCAGCACCATATCTGTGATCCACACACCAAACAATACGTCAAAGACAGACCTCTTGAGGATCTGATACATTGTGTGAATATATGTTTGTGTGTGTTTGTATATACATATATATATATATATATATATATATATACACACACACACACACACACACACACACTACATTTCAAAAGTTTGGGATCAGTGATATTTTTTTAATGTTTTTGTACCAAAAGTAGTCTCTTATGTTCAACAAGGTGCCATTTATTTGATTAAAAAAAAAAAAAAAAAACCCAGTAAAAAATAATGTGTAATATTATCACAATCTAAAATATATTTTAAAATGTAATGTGTTCCTGTGATGGTAAAGCTGTATTTTCCATTACGTCCAGTGTCACATGTTCCTTCAGAAATCATTCTAATATGCTGATTTGATTAAGATACCTTTCTTATGCTGCTTAATATTTTTTGTTAAAATTATACATTTTTTCAAGATTCTTTAAAAAACAGACAGTTCAAAACAATATTTATTTTAAAAAAAACTTTGTAACATGTTTTTTCTGTCATTTTTGATCAAGTTAATGCATCCTTGCTGATGTATATATATATATATATATANNNNNNNNNNTATATATATATATATATTTTTTTTTTTTTTTTTTTACTGACCCAGAACTTTTGAACAGTAATTGTACATATGTATATTAATATACTGGTATCATATTATGTAGACTTGTACAAAATGTAAAATAGTGTGTAATAGTATTTTAACTGTATTACAGCTGCTTTGTGTATTTTGTTCTGTAAATATTAAGAAATGTTTAAATGAACATATATACTGTATATTACTGTCAAACAATTAATAGCAATATATATATATATATATATATATATATATATATATATTCAAATGTAAACCTTTGTATTTTTATTTTTGATAAAGTGAAACCTCAAAATAACATTATATAAAAAGGACACAAAATATGTGTACTATTATATAGTTAAGTTTTAACTTCCAGAA
>TU57433
ATAACATTATATAAAAAGGACACAAAATATGTGTACTATTATATAGTTAAGTTTTAACTTCCAGAAATAAATCTGGGTCATTTGGCTCAGATGCTTTCTATTAATTGAAAAAGTTTCTCCACTCATCCATGAGACTTCATCCACTCTTGCTGGGAAATCACCACCCAACGGATGAGTGGCCACACAAAACAAGACATCCTTTGATTACCTGAATGACTAATAATCTTCACAGACAAGGAAACACAATGGTATTTATGGGAAGCTATTTGAATCTCAGAAGTACTTCAGTAGGCATGAGATGGCTATTACATTACAATAAGGAACTGTAAGCAGCCTAACATTCCTTCAGTTCAGTCATTTTTCAGGAATTAACGATGAACATTGCTCTCTGTTCTTCAGTTGTGTTGCTCCATTGTGATGTTTGTAAGGACTGTCAGAACCATCTATTAAATGAGCTCATTTTTAATTGCCCCACTGCCAAATACAGTAGACACCATCAGAACACAGACAGAAGACATCATACTGTAAAATAACAACTAGTGTGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000009_00094836_00095813.mRNA False 2379 mRNA 0.35 1 94371 96749
TU57433 True 547 lncRNA 0.37 1 96684 97230

Neighbor

gene id symbol gene type direction distance location
CI01000009_00179808_00221387 UGGT2 coding downstream 83059 179808 ~ 221387 (+)
CI01000009_00242093_00247335 FDX1 coding downstream 145212 241961 ~ 247343 (+)
CI01000009_00260081_00285692 RNF17 coding downstream 163157 259906 ~ 285711 (+)
CI01000009_00300778_00315275 NA coding downstream 204029 300778 ~ 315405 (+)
CI01000009_00318494_00322434 NA coding downstream 221507 318256 ~ 323055 (+)
G50469 NA non-coding upstream 14855 79280 ~ 79516 (+)
G50440 NA non-coding upstream 72773 21316 ~ 21598 (+)
G50473 NA non-coding downstream 1137 97886 ~ 99056 (+)
G50480 NA non-coding downstream 20814 117563 ~ 118000 (+)
G50508 NA non-coding downstream 79317 176066 ~ 222848 (+)
G50662 NA non-coding downstream 238290 335039 ~ 335961 (+)
G50664 NA non-coding downstream 261729 358478 ~ 358706 (+)
G50920 NA other downstream 673092 769841 ~ 770233 (+)
CI01000009_01431700_01434463 NA other downstream 1326098 1429873 ~ 1435328 (+)
G51122 NA other downstream 1583397 1680146 ~ 1681966 (+)
CI01000009_01897343_01919208 PIKFYVE other downstream 1797486 1897343 ~ 1919516 (+)
G51274 NA other downstream 2158350 2255099 ~ 2350486 (+)
CI01000009_00094836_00095813 NA other upstream 897 94371 ~ 97230 (+)

Expression


Co-expression Network