G221872 (bag2)


Basic Information

Item Value
gene id G221872
gene name bag2
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 36387252 ~ 36390194 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU301069
tatttatttttaattaaatcttatattgtttgtttcttttctaaTATTCTtaacatttagtttttattattttgtttatgaggtttcttattttatattacttgataaatacttaatatatatatattaaatgagcAGCAAACTCTGGTGTAGTGTCTCAGTTAAAGAAATCATTCCAACCCCGATGCTGATGTTCATGTCCATGATGAACTGTACAGATACAGATAGAAGCATCCCAGTATTTAACACTGTCCATCTGAGTGTGTAATGTAAACTCAGCTATCAGCTGTGATGTAAGAATGTAAACAGTGTGATTTACACTAAGCTTGTTGGTACTGGGAACCAGTGGAGATAGCTGTGTTATATACTGTGATGACCAGCAGCTTGACACTCCAATGAGGAATTCACCCCAgagggcagacagacaggctCTAATTAGAACCTACAGCCTATATTAGCTTATGATACACGACTGTGATTCTTCTAATCTCTGTAAATCAACATTTAGACCTGGTTAATGAATTAATACTGTCTCTTGCAAGTCTCCAGTGCCCCCACTCAGAAGAGCTACAGTGAGACAGGTTTTATTCTGAAGTCTGTGATTAGTTTAAAGTCTGTGGAAAGGGAGTTGCATGAAGAAGGTTTGGAGAAAACTGATATGAAggaatgtttaatatgtttgattttcttttttcttcatttgtttAGATGTGAACCTAAGTTCTGCTCTGggtcagagacagagagaggtgtAGTAAAGTGTGGAAAATAAGCTGTGTTCACTGGAGAAAATGCAGTGAAGTGATAGAAGTGAAATTAATTCAAAACGAAAAGAAAAGAAGCTTTAAAACCTGCAAACAACATTAAAGGTCCTGTACAGCAGGAGTAAACGCATGGGAGAGTCAGTAATGCATAAAAACATCACCTCCATCATTAAATCACTCAGCACACGTTTAATCATTAAGCCTAAATGTGTGTGTCAGGGTCACTGAAGTGTATTTAAATAAGCAGGACTTGAGATGCTAAAGGATCCATATCCTTGTATCATTTTCCCTTAAGGTCTTTAACTTGCAACACAAGCCTGGAACATAATACCAATTCAACATGAACATATCCCAACTTCACTTTATCCCTTAGAATTAATCTTATTAATTAATCTGTCTTACTGTGGCATAAAACAGTTTTTCTCATTCCTGCTCCAGGAAACCCTGTCCAGCACATAGTGATctccctgctttaacacactccTGTAACTCTGAAAGGGCTTTTTAATGAACTGATTATTCGAATCAGGTTTGCTGTGAGAAGGGAAAGCACTAAATGTGCAGACCAGAGGGATCCAGAACCAGGGCTAAGAAACACTGCcttaaaaacattgaaataaaatattgtatttataggAGATATAAAAATGGCCATATCCCATCATCACACCTGTAATTGAAACTGCTTAGCACAGTGCAGTCTTCTGTAAATTATGTTGAAATTAAAGGGTAATTAatccccctgattttagctgactccacccacagctcaaatttgaaaaggcggaaaaaatgtgaggggcactggatgatgtatgggtttaggggcggggggAAAACAGAGAGCTTAATAAAACAGTAGTgagcctctgatagcagtgaggtACAAATGGTTGGGCGGCACCAGGGGGGTGGCATTATTGATTGATGTGCATATTGTGAGTATCCTCGTACtaaagtacacagaaacattGACTTACTGAACAACCATTAAAAAAGTTCAACTGGTGGCTATTTACAAGCAAATATCCACTATTTAGCTATATCGCATGATGTGTTTCTGGCGTTatgaatacataaatatactttGATTTTAGAATGTTGTACTGTACAGCACCATTTTTCATTAGcataagtttttttattatattacccAGCCCTAACATCTGTTCCACTTGGATTATCTAAAAACAAGAGACTTGGTATTTTTGTAGAGTGTACAGGTGAAGCTGGATTGCTGTAATCTAAATAGAGAACCTATGTAAGTAAATGTGTTGGTGGGCTGTTTATATTAGCTTAGTTTCCACATTAACTGCATGGGAGTACATTTGGACACTTTCCTAATACTTACATGcagcacaaaaaaggaataaGATCAGATTTTTGCGGATATGGACCCTTTAATATTCAAGACAAGACTGGAATTGAGATGATATTCTGCTTAAGTTTAAAGATAATACACTGAGTacacattagttttttttcattgtatgtCAAATGTCTCTGAAGAGAGGTAACATTTGAGTGTGATTGAACTAAGAAGTGTAACGAAGTTCTCATTAAGCCAAGTCACACAACAGACGCCAAGAAAACTGTGCAGGACCTTTAAAGTGCAGCACAACATGTACAAATATGGTGATGTCTGGAAGCCTGTGGTCACCTCAGTGGTTAGGAAAGGCACTTGCTACAGTAGTTACTCTGTTCTGTAATCCTTCAGCTGCACCATGATTATTTGCCATTGACACTGTTTGGTTCATCAACCTTCTGATTATCCATGATTTTAATGGTTCTCTCGGCATTACCCATGTTCCTCATCAGAGTCTCGAGGCGCCGCTTGATTTTCTTCTGGTCTTCCAGAGCACAGCTGATCACGATGCTCTGAAACTTCTGGTCAACAGGCACGGCCGGAGCCTCGCTAACGCACGCAGCATGAAGAGCCTGCAGCTTCTTTACTGCGCCCTCCAAGTTGTCCAGCACATTATTGGCTATTTCATCAATAATGGCCATGGCTTTCTTCAGGGCGTCTTCCTGCTGGTCGTTTCGGATCGTGTCTACCGAGACCTGGACCGTCAGGGTTCTGGTCATGAGCCTGTTGGCAGTAAGCGTGagctcttctcttt

Function

symbol description
bag2 Predicted to enable adenyl-nucleotide exchange factor activity. Predicted to be involved in protein stabilization. Is expressed in heart rudiment; heart tube; myotome; and primitive heart tube. Orthologous to human BAG2 (BAG cochaperone 2).

NR:

description
BAG family molecular chaperone regulator 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU301069 True 2884 lncRNA 0.39 3 36387252 36390194

Neighbor

gene id symbol gene type direction distance location
rab23 rab23,LOC107699166 coding upstream 5276 36361444 ~ 36381976 (+)
LOC103034782 NA coding upstream 30682 36322340 ~ 36356570 (+)
perp perp coding upstream 233467 36146962 ~ 36153785 (+)
wdr92 wdr92 coding upstream 279023 36103079 ~ 36108229 (+)
LOC103037384 ppp3r1,PPP3R1,LOC108441257,LOC107727894,LOC107699153,LOC106024317 coding upstream 287599 36076498 ~ 36099653 (+)
LOC103029801 dst coding downstream 32918 36423112 ~ 36574340 (+)
LOC103028640 LOC108440913 coding downstream 279441 36669635 ~ 36674106 (+)
LOC103027910 NA coding downstream 300887 36691081 ~ 36700401 (+)
kif15 kif15 coding downstream 314485 36704679 ~ 36731431 (+)
tdrd9 tdrd9 coding downstream 345656 36735850 ~ 36767233 (+)
G221871 NA non-coding upstream 1713 36365601 ~ 36385539 (+)
G221856 NA non-coding upstream 108500 36278507 ~ 36278752 (+)
G221852 NA non-coding upstream 177214 36209463 ~ 36210038 (+)
G221848 NA non-coding upstream 202629 36184351 ~ 36184623 (+)
G221843 NA non-coding upstream 208340 36178457 ~ 36178912 (+)
G221879 NA non-coding downstream 53112 36443306 ~ 36445372 (+)
G221891 NA non-coding downstream 230094 36620288 ~ 36623795 (+)
G221973 NA non-coding downstream 336324 36726518 ~ 36728089 (+)
G221995 NA non-coding downstream 443833 36834027 ~ 36958193 (+)
G221993 NA non-coding downstream 485046 36875240 ~ 36923898 (+)
G221737 NA other upstream 330562 36052516 ~ 36056690 (+)
G221728 fbxo9 other upstream 414898 35969989 ~ 35972354 (+)
gclc gclc,LOC107597697,LOC107664701,LOC107712340,LOC107688787 other upstream 498437 35870018 ~ 35888815 (+)
LOC103031497 NA other upstream 1168874 35208431 ~ 35218378 (+)
srsf5 srsf5,srsf5a,LOC107553206,LOC107736490,LOC108411053,LOC107602962 other upstream 1361654 35018442 ~ 35025598 (+)
G221878 NA other downstream 12954 36403148 ~ 36409041 (+)
mnat1 mnat1 other downstream 586212 36976406 ~ 36991484 (+)
slc38a6 NA other downstream 610891 37001085 ~ 37019302 (+)
LOC103040744 LOC103040744,LOC108439706,LOC108263332 other downstream 2345745 38735939 ~ 38744184 (+)
oip5 NA other downstream 2504679 38894873 ~ 38898833 (+)

Expression


Co-expression Network