Gene
RNA
| Item | Value |
|---|---|
| gene id | G222427 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035921.1 |
| NCBI id | CM008324.1 |
| chromosome length | 46505145 |
| location | 38732270 ~ 38732522 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU301769 | True | 253 | lncRNA | 0.50 | 1 | 38732270 | 38732522 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103041043 | rdh11,LOC108439707,LOC107585486,LOC107724212,LOC107588583,LOC107705384,LOC105896832 | coding | upstream | 43655 | 38679629 ~ 38688615 (+) |
| arg2 | arg2,LOC107675544 | coding | upstream | 73928 | 38648585 ~ 38658342 (+) |
| LOC103043501 | pqlc3,LOC107706924,LOC107675554,LOC107681540,LOC107757120 | coding | upstream | 287572 | 38436569 ~ 38444698 (+) |
| sobp | sobp | coding | upstream | 307201 | 38359610 ~ 38425069 (+) |
| c25h6orf203 | cunh6orf203,LOC103046561 | coding | upstream | 466757 | 38257503 ~ 38265513 (+) |
| golga5 | golga5 | coding | downstream | 128091 | 38860613 ~ 38872144 (+) |
| ndufaf1 | ndufaf1 | coding | downstream | 152752 | 38885274 ~ 38888539 (+) |
| tmem39b | tmem39b,LOC107675583 | coding | downstream | 175044 | 38907566 ~ 38915971 (+) |
| ccdc28b | ccdc28b,LOC107585497,LOC107675524,LOC107705395 | coding | downstream | 185109 | 38917631 ~ 38930759 (+) |
| iqcc | NA | coding | downstream | 200153 | 38932675 ~ 38940265 (+) |
| G222426 | NA | non-coding | upstream | 330 | 38731740 ~ 38731940 (+) |
| G222415 | NA | non-coding | upstream | 40524 | 38690748 ~ 38691746 (+) |
| G222413 | NA | non-coding | upstream | 53759 | 38675847 ~ 38678511 (+) |
| G222412 | vti1b | non-coding | upstream | 57250 | 38667442 ~ 38675020 (+) |
| G222411 | NA | non-coding | upstream | 68569 | 38662344 ~ 38663701 (+) |
| G222436 | NA | non-coding | downstream | 65567 | 38798089 ~ 38798419 (+) |
| G222442 | NA | non-coding | downstream | 90218 | 38822740 ~ 38825079 (+) |
| G222447 | NA | non-coding | downstream | 114055 | 38846577 ~ 38847294 (+) |
| G222449 | NA | non-coding | downstream | 126250 | 38858772 ~ 38859136 (+) |
| G222454 | NA | non-coding | downstream | 158212 | 38890734 ~ 38893331 (+) |
| slc38a6 | NA | other | upstream | 1712968 | 37001085 ~ 37019302 (+) |
| mnat1 | mnat1 | other | upstream | 1740786 | 36976406 ~ 36991484 (+) |
| G221878 | NA | other | upstream | 2323229 | 36403148 ~ 36409041 (+) |
| G221737 | NA | other | upstream | 2675580 | 36052516 ~ 36056690 (+) |
| G221728 | fbxo9 | other | upstream | 2759916 | 35969989 ~ 35972354 (+) |
| LOC103040744 | LOC103040744,LOC108439706,LOC108263332 | other | downstream | 3417 | 38735939 ~ 38744184 (+) |
| oip5 | NA | other | downstream | 162351 | 38894873 ~ 38898833 (+) |
| LOC103047486 | LOC108443507 | other | downstream | 465185 | 39197707 ~ 39271138 (+) |
| G222694 | ppp2r5e,LOC102786035 | other | downstream | 945980 | 39678502 ~ 39714015 (+) |
| zfyve21 | zfyve21 | other | downstream | 1598551 | 40331073 ~ 40339652 (+) |
