G222603


Basic Information

Item Value
gene id G222603
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 39271262 ~ 39271357 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU301999
gctcaactGATCATAAAggaacactttgtagttctataataatgaCAGTCTATAGTCCtgcatctgtttctctgcatactttattattattattat

Function

GO: NA

KEGG:

id description
ko04740 Olfactory transduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU301999 True 96 lncRNA 0.30 1 39271262 39271357

Neighbor

gene id symbol gene type direction distance location
LOC103040939 LOC108414593 coding upstream 118832 39052496 ~ 39152430 (+)
dcdc2b dcdc2b coding upstream 298153 38941253 ~ 38973109 (+)
iqcc NA coding upstream 330997 38932675 ~ 38940265 (+)
ccdc28b ccdc28b,LOC107585497,LOC107675524,LOC107705395 coding upstream 340503 38917631 ~ 38930759 (+)
tmem39b tmem39b,LOC107675583 coding upstream 355291 38907566 ~ 38915971 (+)
LOC103047800 NA coding downstream 63924 39335281 ~ 39371359 (+)
LOC111196043 NA coding downstream 102625 39373982 ~ 39376638 (+)
gphb5 NA coding downstream 306415 39577772 ~ 39583218 (+)
cdh23 cdh23,LOC107679169,LOC107734258,LOC107676383 coding downstream 814728 40086085 ~ 40110675 (+)
eif3l eif3l,LOC102789421 coding downstream 927031 40198388 ~ 40207129 (+)
G222595 NA non-coding upstream 96686 39174182 ~ 39174576 (+)
G222589 NA non-coding upstream 109574 39161487 ~ 39161688 (+)
G222465 NA non-coding upstream 212352 38978249 ~ 39058910 (+)
G222454 NA non-coding upstream 377931 38890734 ~ 38893331 (+)
G222449 NA non-coding upstream 412126 38858772 ~ 38859136 (+)
G222601 NA non-coding downstream 3181 39274538 ~ 39274832 (+)
G222631 NA non-coding downstream 86317 39357674 ~ 39359817 (+)
G222632 NA non-coding downstream 100290 39371647 ~ 39408437 (+)
G222695 NA non-coding downstream 450201 39721558 ~ 39724437 (+)
G222708 NA non-coding downstream 467720 39739077 ~ 39763389 (+)
LOC103047486 LOC108443507 other upstream 124 39197707 ~ 39271138 (+)
oip5 NA other upstream 372429 38894873 ~ 38898833 (+)
LOC103040744 LOC103040744,LOC108439706,LOC108263332 other upstream 527078 38735939 ~ 38744184 (+)
slc38a6 NA other upstream 2251960 37001085 ~ 37019302 (+)
mnat1 mnat1 other upstream 2279778 36976406 ~ 36991484 (+)
G222694 ppp2r5e,LOC102786035 other downstream 407145 39678502 ~ 39714015 (+)
zfyve21 zfyve21 other downstream 1059716 40331073 ~ 40339652 (+)
LOC103047655 NA other downstream 1078450 40349807 ~ 40352656 (+)
LOC103045954 ypel5,slc30a10,LOC107568027,LOC108441457,LOC102788175,LOC102210471 other downstream 1794301 41065658 ~ 41073316 (+)
LOC103046574 NA other downstream 1913604 41184961 ~ 41193209 (+)

Expression


Co-expression Network