G222819


Basic Information

Item Value
gene id G222819
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 40050507 ~ 40113663 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU302316
cccccctttgctctgattactgctttgcacactcttggcatcattctctcaatgagcttcaagaggtggccacctgaaataaaaagttttccaacagtcttgaaggaaggaaggagttcccagaggtgtttattagcacttgttgctcctttgtcttcttcactctgtgctccagctcaccccaaaccatctggattgggttcaggtccggtgactgtggaggttcagctcattttttattgttaagtacataaaactccacatgtgttcattcat

Function

NR:

description
PREDICTED: uncharacterized protein LOC106605561

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302316 True 276 lncRNA 0.45 2 40050507 40113663

Neighbor

gene id symbol gene type direction distance location
gphb5 NA coding upstream 467289 39577772 ~ 39583218 (+)
LOC111196043 NA coding upstream 673869 39373982 ~ 39376638 (+)
LOC103047800 NA coding upstream 679148 39335281 ~ 39371359 (+)
LOC103040939 LOC108414593 coding upstream 898077 39052496 ~ 39152430 (+)
dcdc2b dcdc2b coding upstream 1077398 38941253 ~ 38973109 (+)
eif3l eif3l,LOC102789421 coding downstream 84725 40198388 ~ 40207129 (+)
LOC103047342 NA coding downstream 94743 40208406 ~ 40217036 (+)
LOC103045354 fndc5,LOC108237574,LOC107575402,LOC108238726,LOC106589070,LOC102792536 coding downstream 872511 40986174 ~ 41008038 (+)
LOC111196049 NA coding downstream 975839 41089502 ~ 41098828 (+)
LOC111195996 NA coding downstream 1082322 41195985 ~ 41198825 (+)
G222817 NA non-coding upstream 8781 40040422 ~ 40041726 (+)
G222732 NA non-coding upstream 239681 39808569 ~ 39810826 (+)
G222731 NA non-coding upstream 242080 39805895 ~ 39808427 (+)
G222734 NA non-coding upstream 244705 39803245 ~ 39805802 (+)
G222708 NA non-coding upstream 287118 39739077 ~ 39763389 (+)
G222850 NA non-coding downstream 127095 40240758 ~ 40241004 (+)
G222869 NA non-coding downstream 195285 40308948 ~ 40309775 (+)
G222868 NA non-coding downstream 196217 40309880 ~ 40312837 (+)
G222884 NA non-coding downstream 227891 40341554 ~ 40342874 (+)
G222887 NA non-coding downstream 286114 40399777 ~ 40400065 (+)
G222694 ppp2r5e,LOC102786035 other upstream 336492 39678502 ~ 39714015 (+)
LOC103047486 LOC108443507 other upstream 779369 39197707 ~ 39271138 (+)
oip5 NA other upstream 1151674 38894873 ~ 38898833 (+)
LOC103040744 LOC103040744,LOC108439706,LOC108263332 other upstream 1306323 38735939 ~ 38744184 (+)
slc38a6 NA other upstream 3031205 37001085 ~ 37019302 (+)
zfyve21 zfyve21 other downstream 217410 40331073 ~ 40339652 (+)
LOC103047655 NA other downstream 236144 40349807 ~ 40352656 (+)
LOC103045954 ypel5,slc30a10,LOC107568027,LOC108441457,LOC102788175,LOC102210471 other downstream 951995 41065658 ~ 41073316 (+)
LOC103046574 NA other downstream 1071298 41184961 ~ 41193209 (+)
gfra1 gfra1a,LOC108442611,LOC107568111,LOC107666504 other downstream 2130148 42243811 ~ 42371581 (+)

Expression


Co-expression Network