G223192


Basic Information

Item Value
gene id G223192
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 42452849 ~ 42453237 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU302842
tctttaaagctcaccttccgcgaaaatccgatttttcttgttttttgtggaatacagtaggtctctccgagttgaatgtgtacacctgcacattaaactgttttgcagcccccattgtctgcaggagctaagcaaagaaatcccccctcccccctccgaaaaacgggtgaattttgaattatctttctgcctacgtaggcagaaactcacagaccagcccaccttggctcgagaaactcccagaggcggagctgaagcgacgcaacatcaccgctcatcagttaggaggtgggaggcagtgagcggcagagcggcggaggggcgtcgcagtgctcctagccaatcagaggagagatatttgcatgctgtttgcatgtatgaatattcat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU302842 True 389 lncRNA 0.50 1 42452849 42453237

Neighbor

gene id symbol gene type direction distance location
LOC103043683 NA coding upstream 230795 42215743 ~ 42222054 (+)
LOC103042542 NA coding upstream 1158599 41287961 ~ 41294250 (+)
LOC103044280 NA coding upstream 1173771 41276985 ~ 41279078 (+)
LOC111195996 NA coding upstream 1254024 41195985 ~ 41198825 (+)
LOC111196049 NA coding upstream 1354021 41089502 ~ 41098828 (+)
LOC103047539 NA coding downstream 258223 42711460 ~ 42721934 (+)
fam204a fam204a coding downstream 321008 42774245 ~ 42802285 (+)
rab11fip2 rab11fip2 coding downstream 455268 42908505 ~ 42935835 (+)
LOC103028407 NA coding downstream 736123 43189360 ~ 43193440 (+)
LOC103043584 LOC108426108 coding downstream 847649 43300886 ~ 43310949 (+)
trnag-gcc_45 NA non-coding upstream 34180 42418599 ~ 42418669 (+)
trnag-gcc_44 NA non-coding upstream 34345 42418434 ~ 42418504 (+)
trnag-gcc_43 NA non-coding upstream 34510 42418269 ~ 42418339 (+)
trnag-gcc_42 NA non-coding upstream 34675 42418104 ~ 42418174 (+)
trnag-gcc_41 NA non-coding upstream 34840 42417939 ~ 42418009 (+)
trnag-gcc_46 NA non-coding downstream 10062 42463299 ~ 42463369 (+)
G223198 NA non-coding downstream 36346 42489583 ~ 42489875 (+)
G223201 NA non-coding downstream 78873 42532110 ~ 42532422 (+)
G223207 NA non-coding downstream 176740 42629977 ~ 42630263 (+)
trnag-gcc_47 NA non-coding downstream 248420 42701657 ~ 42701727 (+)
gfra1 gfra1a,LOC108442611,LOC107568111,LOC107666504 other upstream 81268 42243811 ~ 42371581 (+)
LOC103046574 NA other upstream 1259640 41184961 ~ 41193209 (+)
LOC103045954 ypel5,slc30a10,LOC107568027,LOC108441457,LOC102788175,LOC102210471 other upstream 1379533 41065658 ~ 41073316 (+)
LOC103047655 NA other upstream 2100193 40349807 ~ 40352656 (+)
zfyve21 zfyve21 other upstream 2113197 40331073 ~ 40339652 (+)
G223269 NA other downstream 710044 43163281 ~ 43166134 (+)
G223335 micu1 other downstream 1158386 43611623 ~ 43615389 (+)
mcu mcu other downstream 1226914 43680151 ~ 43769000 (+)
mcph1 mcph1 other downstream 2442940 44896177 ~ 44947346 (+)
tmem14a tmem14a,LOC108425445 other downstream 2512459 44965696 ~ 44968097 (+)

Expression


Co-expression Network