G223551


Basic Information

Item Value
gene id G223551
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 44607703 ~ 44611679 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU303418
tcttttttttttgttttttaataaaatgtaaaagaaaatgaattaaactcaagatatgagtagaaaatttgtttagtttcaaatttaccaatgaagcaatgtttattagcccttggccaaacatactgtatgtaatataaatgtgtgtgtgtgtgtgtgggggggggggggggtgtacagtgtgtgtttattgaaaatgtgttttgatatatgtttttcacaaaaaatgagccaatgccaatgagtttgagttagaaaaaatatttttttagtatcatttgatgaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303418 True 289 lncRNA 0.29 2 44607703 44611679

Neighbor

gene id symbol gene type direction distance location
myom2 myom2,LOC107660212,LOC107572023 coding upstream 495853 44060541 ~ 44111850 (+)
oit3 oit3,LOC107564524,LOC107754765,LOC107660216,LOC107717846 coding upstream 822565 43770934 ~ 43785138 (+)
nolc1 nolc1,LOC102197487,LOC107717830,LOC102780538,LOC101478979,LOC102291991 coding upstream 1000509 43594047 ~ 43607194 (+)
LOC103041531 runx3 coding upstream 1038270 43480419 ~ 43569433 (+)
LOC111196053 NA coding upstream 1271717 43331517 ~ 43335986 (+)
agpat5 agpat5,LOC107665182,LOC107717842 coding downstream 339364 44951043 ~ 44964105 (+)
otor otor coding downstream 399582 45011261 ~ 45015961 (+)
pcsk2 pcsk2,LOC107701967,LOC107699156 coding downstream 430971 45042650 ~ 45099054 (+)
dnajc12 NA coding downstream 547859 45159538 ~ 45161992 (+)
LOC103032313 LOC103032313,LOC108442675,LOC105923605,LOC101067607 coding downstream 551037 45162716 ~ 45166158 (+)
G223507 NA non-coding upstream 492567 44110875 ~ 44115136 (+)
G223501 NA non-coding upstream 554260 44052482 ~ 44053443 (+)
G223502 NA non-coding upstream 556374 44050673 ~ 44051329 (+)
G223494 NA non-coding upstream 619456 43986414 ~ 43988247 (+)
G223407 NA non-coding upstream 699065 43908256 ~ 43908638 (+)
G223613 gsta3 non-coding downstream 358131 44969810 ~ 44973409 (+)
G223619 NA non-coding downstream 377380 44989059 ~ 44991630 (+)
LOC111196013 NA non-coding downstream 411485 45023164 ~ 45024529 (+)
G223631 NA non-coding downstream 502947 45114626 ~ 45115824 (+)
G223632 NA non-coding downstream 505344 45117023 ~ 45117227 (+)
mcu mcu other upstream 838703 43680151 ~ 43769000 (+)
G223335 micu1 other upstream 992314 43611623 ~ 43615389 (+)
G223269 NA other upstream 1441569 43163281 ~ 43166134 (+)
gfra1 gfra1a,LOC108442611,LOC107568111,LOC107666504 other upstream 2236122 42243811 ~ 42371581 (+)
LOC103046574 NA other upstream 3414494 41184961 ~ 41193209 (+)
mcph1 mcph1 other downstream 284498 44896177 ~ 44947346 (+)
tmem14a tmem14a,LOC108425445 other downstream 354017 44965696 ~ 44968097 (+)
polh polh other downstream 368723 44980402 ~ 44988010 (+)
LOC107197130 NA other downstream 560163 45171842 ~ 45184947 (+)
gng4 gng4 other downstream 635691 45247370 ~ 45258924 (+)

Expression


Co-expression Network