G223613 (gsta3)


Basic Information

Item Value
gene id G223613
gene name gsta3
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 44969810 ~ 44973409 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU303511
aaaaagagtagcactttttgaaagaaatgtaacataagaaaggcaaagggcaaatattaaccaagtaagctgtttatattgcttgtaatttaggtgaagcgagcatgtgtaaagcattttaatgtaaaattgcttaattttgctgaattaaatacaagcaacaaagtaaacgagtaacaaaaatatgaacaccacacaagggttaatcaaGCCGTACAAGAGAGCTCTAAGCAGGCCTGTTGCAAGCAAACCAAgacaagcaaaccaatcaattgccttcagGCAACGACTGTTTATGAACTGAACGTGTTAGTACCCcatttaaattctgtgatgaacaatgcaggaaagtacagTAACACTGTTAACCCCTCAATGATACGTCTCCCACTAGTTGCTGCCAGTAGCCAGTCAGGCAGGTTAGTGATTCCTGCAGTcgacaaaatatgaaacttctgCTATCTATTTTGCTTGGGAATGGCCCTGGCTTTAAGCATAACCCCTGTTAAAATGTGCTTCACAGAGTAACAACTGATAAAAAGCAGGCTGTTTGTTGTTTTAGTGTGTCCTAGTATTAATTACTAGGAGACCTATCTGCAATATGATAATGTCCTTGagcaaatgacaaaaaagatgcaatatATAAAGGTAACACATCTTCATAAAAATGTGTTAcacatatacataatatatatatattaaattatatattccCATTTGTTTGTATAGCAGGCAAACTAGCTGTATTTTGATCAAACCTTGTATTTCCCTTGCCATGTGCATTTACCCTGTAAAAAtccagtaaaaatatatatgtgtgtgcattCCCCTTAGACTTTGTGTATCATATATATCCTAATATAAAGAATCTGAAAGGGCAGCAGCTCCTAATGCATTGATTTCGCATGTACAGTTTCTCTGCAGTATCATCCTTAAATATCACACAGGTATAAACCTACACCAACCCTCTGGAGAAGTTGAGTCTCTTTCATAACAACTGCCATTACAATCCTCTGAGAGCTTAGTCTCAGATTTCACTGTGAACTAAAAGGTGCGCCCTACGTAAAGCTCACCTGGATGTTGGGGAAAGTTGACAGTATTGTGGGGAACAGCTCTTCAAGCATCAGAGCAACTTCAAAAAGACTGACATCTGCACAGCTCAGCTGGTTACCCACCAAGTACTGAGAGCTGGAGAGAGCCTTCATAGGCTGGAAGACTGCGGACTTTGGCTTTGGTCTCCAGATTGTTCAGCGTACTCTGCTTTTTCTCCGGTGGGGTAAAAGGCACTCCCATGATCAAGTCCATGATGTCTCTAGCACCCTCAGCATATGTGTCGATAAGCCGCTCCTTAAGGTCCTTTCCATACAGGTTGTATTTTCCAGCTATGTAATTCAGGATGGCCTTCGTCTGGACCATCTTCATTCCGTCCATTTCAATTAGTGGAACCTGATGGAACAGCAGATCTCCACTTTCCACCAGCTTTTGGAACTCCTCTTTAGTTGAAAAAAACTTCTCTTCGAACTCAACTCCAGCCACAGTCAGCAGCCAGCGGATCGACTCCATTTTCCCCCGCCCGATGAAATAATGCAGCACCACTTTTCCAGACATGGtttcagaaacagaagcagcTCAATCCGAGGAGAAAAATGATCAGCGGGATCttctgcagcttcagctgaGAGACAGCAGAGCCCCTGACAACTGCCAGAACTTTACATAAACACCGAAACTGCGCTCGGCCAA
>TU303512
aaaaagagtagcactttttgaaagaaatgtaacataagaaaggcaaagggcaaatattaaccaagtaagctgtttatattgcttgtaatttaggtgaagcgagcatgtgtaaagcattttaatgtaaaattgcttaattttgctgaattaaatacaagcaacaaagtaaacgagtaacaaaaatatgaacaccacacaagggttaatcaaGCCGTACAAGAGAGCTCTAAGCAGGCCTGTTGCAAGCAAACCAAgacaagcaaaccaatcaattgccttcagGCAACGACTGTTTATGAACTGAACGTGTTAGTACCCcatttaaattctgtgatgaacaatgcaggaaagtacagTAACACTGTTAACCCCTCAATGATACGTCTCCCACTAGTTGCTGCCAGTAGCCAGTCAGGCAGGTTAGTGATTCCTGCAGTcgacaaaatatgaaacttctgCTATCTATTTTGCTTGGGAATGGCCCTGGCTTTAAGCATAACCCCTGTTAAAATGTGCTTCACAGAGTAACAACTGATAAAAAGCAGGCTGTTTGTTGTTTTAGTGTGTCCTAGTATTAATTACTAGGAGACCTATCTGCAATATGATAATGTCCTTGagcaaatgacaaaaaagatgcaatatATAAAGGTAACACATCTTCATAAAAATGTGTTAcacatatacataatatatatatattaaattatatattccCATTTGTTTGTATAGCAGGCAAACTAGCTGTATTTTGATCAAACCTTGTATTTCCCTTGCCATGTGCATTTACCCTGTAAAAAtccagtaaaaatatatatgtgtgtgcattCCCCTTAGACTTTGTGTATCATATATATCCTAATATAAAGAATCTGAAAGGGCAGCAGCTCCTAATGCATTGATTTCGCATGTACAGTTTCTCTGCAGTATCATCCTTAAATATCACACAGGTATAAACCTACACCAACCCTCTGGAGAAGTTGAGTCTCTTTCATAACAACTGCCATTACAATCCTCTGAGAGCTTAGTCTCAGATTTCACTGTGAACTAAAAGGTGCGCCCTACGTAAAGCTCACCTGGATGTTGGGGAAAGTTGACAGTATTGTGGGGAACAGCTCTTCAAGCATCAGAGCAACTTCAAAAAGACTGACATCTGCACAGCTCAGCTGGTTACCCACCAAGTACTGAGAGCTGGAGAGAGCCTTCATAGGCTGGAAGACTGCGGACTTTGGCTTTGGTCTCCAGATTGTTCAGCGTACTCTGCTTTTTCTCCGGTGGGGTAAAAGGCACTCCCATGATCAAGTCCATGATGTCTCTAGCACCCTCAGCATATGTGTCGAtcctAGCCGCTCCTTAAGGTCCTTTCCATACAGGTTGTATTTTCCAGCTATGTAATTCAGGATGGCCTTCGTCTGGACCATCTTCATTCCGTCCATTTCAATTAGTGGAACCTGATGGAACAGCAGATCTCCACTTTCCACCAGCTTTTGGAACTCCTCTTTAGTTGAAAAAAACTTCTCTTCGAACTCAACTCCAGCCACAGTCAGCAGCCAGCGGATCGACTCCATTTTCCCCCGCCCGATGAAATAATGCAGCACCACTTTTCCAGACATGGtttcagaaacagaagcagcTCAATCCGAGGAGAAAAATGATCAGCGGGATCttctgcagcttcagctgaGAGACAGCAGAGCCCCTGACAACTGCCAGAACTTTACATAAACACCGAAACTGCGCTCGGCCAA
>TU303513
aaaaagagtagcactttttgaaagaaatgtaacataagaaaggcaaagggcaaatattaaccaagtaagctgtttatattgcttgtaatttaggtgaagcgagcatgtgtaaagcattttaatgtaaaattgcttaattttgctgaattaaatacaagcaacaaagtaaacgagtaacaaaaatatgaacaccacacaagggttaatcaaGCCGTACAAGAGAGCTCTAAGCAGGCCTGTTGCAAGCAAACCAAgacaagcaaaccaatcaattgccttcagGCAACGACTGTTTATGAACTGAACGTGTTAGTACCCcatttaaattctgtgatgaacaatgcaggaaagtacagTAACACTGTTAACCCCTCAATGATACGTCTCCCACTAGTTGCTGCCAGTAGCCAGTCAGGCAGGTTAGTGATTCCTGCAGTcgacaaaatatgaaacttctgCTATCTATTTTGCTTGGGAATGGCCCTGGCTTTAAGCATAACCCCTGTTAAAATGTGCTTCACAGAGTAACAACTGATAAAAAGCAGGCTGTTTGTTGTTTTAGTGTGTCCTAGTATTAATTACTAGGAGACCTATCTGCAATATGATAATGTCCTTGagcaaatgacaaaaaagatgcaatatATAAAGGTAACACATCTTCATAAAAATGTGTTAcacatatacataatatatatatattaaattatatattccCATTTGTTTGTATAGCAGGCAAACTAGCTGTATTTTGATCAAACCTTGTATTTCCCTTGCCATGTGCATTTACCCTGTAAAAAtccagtaaaaatatatatgtgtgtgcattCCCCTTAGACTTTGTGTATCATATATATCCTAATATAAAGAATCTGAAAGGGCAGCAGCTCCTAATGCATTGATTTCGCATGTACAGTTTCTCTGCAGTATCATCCTTAAATATCACACAGGTATAAACCTACACCAACCCTCTGGAGAAGTTGAGTCTCTTTCATAACAACTGCCATTACAATCCTCTGAGAGCTTAGTCTCAGATTTCACTGTGAACTAAAAGGTGCGCCCTACGTAAAGCTCACCTGGATGTTGGGGAAAGTTGACAGTATTGTGGGGAACAGCTCTTCAAGCATCAGAGCAACTTCAAAAAGACTGACATCTGCACAGCTCAGCTGGTTACCCACCAAGTACTGAGAGCTGGAGAGAGCTTTTCATAGGCTGGAAGACTGCGGACTTTGGCTTTGGTCTCCAGATTGTTCAGCGTACTCTGCTTTTTCTCCGGTGGGGTAAAAGGCACTCCCATGATCAAGTCCATGATGTCTCTAGCACCCTCAGCATATGTGTCGAtcctAGCCGCTCCTTAAGGTCCTTTCCATACAGGTTGTATTTTCCAGCTATGTAATTCAGGATGGCCTTCGTCTGGACCATCTTCATTCCGTCCATTTCAATTAGTGGAACCTGATGGAACAGCAGATCTCCACTTTCCACCAGCTTTTGGAACTCCTCTTTAGTTGAAAAAAACTTCTCTTCGAACTCAACTCCAGCCACAGTCAGCAGCCAGCGGATCGACTCCATTTTCCCCCGCCCGATGAAATAATGCAGCACCACTTTTCCAGACATGGtttcagaaacagaagcagcTCAATCCGAGGAGAAAAATGATCAGCGGGATCttctgcagcttcagctgaGAGACAGCAGAGCCCCTGACAACTGCCAGAACTTTACATAAACACCGAAACTGCGCTCGGCCAA

Function

symbol description
gsta3 Predicted to enable glutathione transferase activity. Predicted to act upstream of or within glutathione metabolic process. Is expressed in brain; gill; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in asthma and ovarian cancer. Orthologous to several human genes including GSTA1 (glutathione S-transferase alpha 1); GSTA2 (glutathione S-transferase alpha 2); and GSTA4 (glutathione S-transferase alpha 4).

NR:

description
glutathione S-transferase 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303511 False 1743 lncRNA 0.41 6 44969810 44973409
TU303512 False 1745 lncRNA 0.41 6 44969810 44973409
TU303513 True 1746 lncRNA 0.41 6 44969810 44973409

Neighbor

gene id symbol gene type direction distance location
agpat5 agpat5,LOC107665182,LOC107717842 coding upstream 5705 44951043 ~ 44964105 (+)
myom2 myom2,LOC107660212,LOC107572023 coding upstream 857960 44060541 ~ 44111850 (+)
oit3 oit3,LOC107564524,LOC107754765,LOC107660216,LOC107717846 coding upstream 1184672 43770934 ~ 43785138 (+)
nolc1 nolc1,LOC102197487,LOC107717830,LOC102780538,LOC101478979,LOC102291991 coding upstream 1362616 43594047 ~ 43607194 (+)
LOC103041531 runx3 coding upstream 1400377 43480419 ~ 43569433 (+)
otor otor coding downstream 37852 45011261 ~ 45015961 (+)
pcsk2 pcsk2,LOC107701967,LOC107699156 coding downstream 69241 45042650 ~ 45099054 (+)
dnajc12 NA coding downstream 186129 45159538 ~ 45161992 (+)
LOC103032313 LOC103032313,LOC108442675,LOC105923605,LOC101067607 coding downstream 189307 45162716 ~ 45166158 (+)
gpatch11 NA coding downstream 193937 45167346 ~ 45171173 (+)
G223551 NA non-coding upstream 358131 44607703 ~ 44611679 (+)
G223507 NA non-coding upstream 854674 44110875 ~ 44115136 (+)
G223501 NA non-coding upstream 916367 44052482 ~ 44053443 (+)
G223502 NA non-coding upstream 918481 44050673 ~ 44051329 (+)
G223494 NA non-coding upstream 981563 43986414 ~ 43988247 (+)
G223619 NA non-coding downstream 15650 44989059 ~ 44991630 (+)
LOC111196013 NA non-coding downstream 49755 45023164 ~ 45024529 (+)
G223631 NA non-coding downstream 141217 45114626 ~ 45115824 (+)
G223632 NA non-coding downstream 143614 45117023 ~ 45117227 (+)
G223635 NA non-coding downstream 147871 45121280 ~ 45121699 (+)
tmem14a tmem14a,LOC108425445 other upstream 1713 44965696 ~ 44968097 (+)
mcph1 mcph1 other upstream 22464 44896177 ~ 44947346 (+)
mcu mcu other upstream 1200810 43680151 ~ 43769000 (+)
G223335 micu1 other upstream 1354421 43611623 ~ 43615389 (+)
G223269 NA other upstream 1803676 43163281 ~ 43166134 (+)
polh polh other downstream 6993 44980402 ~ 44988010 (+)
LOC107197130 NA other downstream 198433 45171842 ~ 45184947 (+)
gng4 gng4 other downstream 273961 45247370 ~ 45258924 (+)
arid4b arid4b other downstream 319593 45293002 ~ 45333281 (+)
G223798 NA other downstream 424287 45397696 ~ 45402815 (+)

Expression


Co-expression Network