G223632


Basic Information

Item Value
gene id G223632
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 45117023 ~ 45117227 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU303544
acaaaccaaacagggcagggaaatataaacaagggaataaactaataaacacaaagcaggggtatatacaaggaactagggaacacggaaataaacaagaaactagaaacattaaacaagagataaacacagagactaagggcgcgaggaacagaggctatgaaacacagagagacaaacgacaggggaaggtgcaaagaccgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU303544 True 205 lncRNA 0.41 1 45117023 45117227

Neighbor

gene id symbol gene type direction distance location
pcsk2 pcsk2,LOC107701967,LOC107699156 coding upstream 17969 45042650 ~ 45099054 (+)
otor otor coding upstream 101062 45011261 ~ 45015961 (+)
agpat5 agpat5,LOC107665182,LOC107717842 coding upstream 152918 44951043 ~ 44964105 (+)
myom2 myom2,LOC107660212,LOC107572023 coding upstream 1005173 44060541 ~ 44111850 (+)
oit3 oit3,LOC107564524,LOC107754765,LOC107660216,LOC107717846 coding upstream 1331885 43770934 ~ 43785138 (+)
dnajc12 NA coding downstream 42311 45159538 ~ 45161992 (+)
LOC103032313 LOC103032313,LOC108442675,LOC105923605,LOC101067607 coding downstream 45489 45162716 ~ 45166158 (+)
gpatch11 NA coding downstream 50119 45167346 ~ 45171173 (+)
lyst lyst coding downstream 68417 45185644 ~ 45245378 (+)
b3galnt2 b3galnt2,LOC107667096 coding downstream 148705 45265932 ~ 45277765 (+)
G223631 NA non-coding upstream 1199 45114626 ~ 45115824 (+)
LOC111196013 NA non-coding upstream 92494 45023164 ~ 45024529 (+)
G223619 NA non-coding upstream 125393 44989059 ~ 44991630 (+)
G223613 gsta3 non-coding upstream 143614 44969810 ~ 44973409 (+)
G223551 NA non-coding upstream 505344 44607703 ~ 44611679 (+)
G223635 NA non-coding downstream 4053 45121280 ~ 45121699 (+)
G223636 NA non-coding downstream 5402 45122629 ~ 45122954 (+)
G223637 mypn non-coding downstream 7652 45124879 ~ 45125201 (+)
G223640 NA non-coding downstream 10020 45127247 ~ 45127447 (+)
G223642 NA non-coding downstream 17449 45134676 ~ 45135048 (+)
polh polh other upstream 129013 44980402 ~ 44988010 (+)
tmem14a tmem14a,LOC108425445 other upstream 148926 44965696 ~ 44968097 (+)
mcph1 mcph1 other upstream 169677 44896177 ~ 44947346 (+)
mcu mcu other upstream 1348023 43680151 ~ 43769000 (+)
G223335 micu1 other upstream 1501634 43611623 ~ 43615389 (+)
LOC107197130 NA other downstream 54615 45171842 ~ 45184947 (+)
gng4 gng4 other downstream 130143 45247370 ~ 45258924 (+)
arid4b arid4b other downstream 175775 45293002 ~ 45333281 (+)
G223798 NA other downstream 280469 45397696 ~ 45402815 (+)
G223850 NA other downstream 407171 45524398 ~ 45532148 (+)

Expression


Co-expression Network