Gene
RNA
| Item | Value |
|---|---|
| gene id | G223635 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035921.1 |
| NCBI id | CM008324.1 |
| chromosome length | 46505145 |
| location | 45121280 ~ 45121699 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU303548 | True | 420 | lncRNA | 0.50 | 1 | 45121280 | 45121699 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pcsk2 | pcsk2,LOC107701967,LOC107699156 | coding | upstream | 22226 | 45042650 ~ 45099054 (+) |
| otor | otor | coding | upstream | 105319 | 45011261 ~ 45015961 (+) |
| agpat5 | agpat5,LOC107665182,LOC107717842 | coding | upstream | 157175 | 44951043 ~ 44964105 (+) |
| myom2 | myom2,LOC107660212,LOC107572023 | coding | upstream | 1009430 | 44060541 ~ 44111850 (+) |
| oit3 | oit3,LOC107564524,LOC107754765,LOC107660216,LOC107717846 | coding | upstream | 1336142 | 43770934 ~ 43785138 (+) |
| dnajc12 | NA | coding | downstream | 37839 | 45159538 ~ 45161992 (+) |
| LOC103032313 | LOC103032313,LOC108442675,LOC105923605,LOC101067607 | coding | downstream | 41017 | 45162716 ~ 45166158 (+) |
| gpatch11 | NA | coding | downstream | 45647 | 45167346 ~ 45171173 (+) |
| lyst | lyst | coding | downstream | 63945 | 45185644 ~ 45245378 (+) |
| b3galnt2 | b3galnt2,LOC107667096 | coding | downstream | 144233 | 45265932 ~ 45277765 (+) |
| G223632 | NA | non-coding | upstream | 4053 | 45117023 ~ 45117227 (+) |
| G223631 | NA | non-coding | upstream | 5456 | 45114626 ~ 45115824 (+) |
| LOC111196013 | NA | non-coding | upstream | 96751 | 45023164 ~ 45024529 (+) |
| G223619 | NA | non-coding | upstream | 129650 | 44989059 ~ 44991630 (+) |
| G223613 | gsta3 | non-coding | upstream | 147871 | 44969810 ~ 44973409 (+) |
| G223636 | NA | non-coding | downstream | 930 | 45122629 ~ 45122954 (+) |
| G223637 | mypn | non-coding | downstream | 3180 | 45124879 ~ 45125201 (+) |
| G223640 | NA | non-coding | downstream | 5548 | 45127247 ~ 45127447 (+) |
| G223642 | NA | non-coding | downstream | 12977 | 45134676 ~ 45135048 (+) |
| G223643 | NA | non-coding | downstream | 16645 | 45138344 ~ 45139201 (+) |
| polh | polh | other | upstream | 133270 | 44980402 ~ 44988010 (+) |
| tmem14a | tmem14a,LOC108425445 | other | upstream | 153183 | 44965696 ~ 44968097 (+) |
| mcph1 | mcph1 | other | upstream | 173934 | 44896177 ~ 44947346 (+) |
| mcu | mcu | other | upstream | 1352280 | 43680151 ~ 43769000 (+) |
| G223335 | micu1 | other | upstream | 1505891 | 43611623 ~ 43615389 (+) |
| LOC107197130 | NA | other | downstream | 50143 | 45171842 ~ 45184947 (+) |
| gng4 | gng4 | other | downstream | 125671 | 45247370 ~ 45258924 (+) |
| arid4b | arid4b | other | downstream | 171303 | 45293002 ~ 45333281 (+) |
| G223798 | NA | other | downstream | 275997 | 45397696 ~ 45402815 (+) |
| G223850 | NA | other | downstream | 402699 | 45524398 ~ 45532148 (+) |
