LOC103036371


Basic Information

Item Value
gene id LOC103036371
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 6411469 ~ 6415618 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229480.3
ctttgggctggatatttttttggacctggcaaccctgcctcACCTCCTTCTCCAGCATTTTCCTTCCCTGTTAAAGTAAAGCTGAAGTTCCTGTTAAAAAGTCACTATACTCCTTATAAAAGCCTGTTTTCTGTCCTATTTTAGGCTGATATCACCCAGACATTATCCTTTAAAGGTAAAGATAGAGGGGAAACGTAATAAGTGTAGGTTTAACATGGCAGGGCTGTTCGTCCTGGTATCGCTGATTTTGTCCACGCCGGCGTGTTTAAGTCAGTCCTCGGGGTCTGAAAACCAGCCCAAAGCCTCTGGTTTGTGGCAGACTCTGCAGTCAGTGTCCACCAGTCTGTGTGAGGACGGACACGGGTTCCTGGTGTCTCTGTTTGGCAGACAGTCCGTGGATTCAGGACTGAAGacCCTAAGAGAGATTACAACGTGGGCTTTAGAGTCTACTGCTGGTTCTCTGAACATACTGGCCTCATATGTCACAGAAGTGCTAGGAGCAGCTGGAATCACTGCCAATCTGCCTGTGAAGCGCATCACTCCGGAAGGTGTTGCGTTTGTTACTAAGTGGGTCCTGTTGGCTGTGCTTGTCTACTGGATCCTGTCCTTGGCGGTGTGCTTTGTATCAGGGATAGTGCAGCGTACTCTGTGGCTAGTGAAGATCACTGTCGCCATTGCCATGTTTGGTCTCATTCTAAGTGATACTGGTGCCACTGCTGAAACCACAGCAATGAGACTGGCTGGATTAATGCTTGCCTGCATCCTGCTGGGTATCGGACCCTCACCGTTCAAGGGagatacaaatacacacatggAAGTGAAAGTTAAGGTGCTGGAGAGGAAGGTAAGAGAGTTGGAGAAGAAGAGCAAAGATGACTAAGGGGCACAAATCCAGGATCACTAAACTGAAATGATCCTGACTTTAGATCTGTGTTTTGTGActgaattattatattatatcatactCTTAAGCCTTGACCTGAggactgtatatatttttttttttgtgtttcagcTCTGTTACAGCAAATTTAATGCAAAAACTGAATCACAAGGGTTTGATTTTCTGGACAGGGATTAATCCTATTTTTTGTTCGTCTTCAATGAAAACCTCTCCATTTCAAAATGCTGTgctgttttgtttgtgtattcTGTAAATGTCCTTATTTCATTCTGATAGAGCTTGACAAGATGCATAATATAGCTATTATGTATGTTCTACTAGGTTGATACAAAACAGCATCTTTTTAAAgagattcctttttttttctattctgtattatgtatgttAGGAATGCatgaaatatttggcaaccaaataagtgaaaagacagaaaagtTATACTGTTACACATTTATTGACGTCATTTTGCAGCCTTTCTTGTGTCTTTGGAATATGGTGGAGACAGGCTCACAATCAGTTGTAGttgtgtaattgttttttatatatatataatataaatgaaagGCAATAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229480.3 True 1477 mRNA 0.41 3 6411469 6415618

Neighbor

gene id symbol gene type direction distance location
LOC103036975 NA coding upstream 12988 6387504 ~ 6398481 (+)
trnak-cuu_9 NA coding upstream 85412 6325985 ~ 6326057 (+)
LOC103038786 LOC103368813 coding upstream 87239 6314852 ~ 6324230 (+)
LOC103039100 NA coding upstream 98862 6302716 ~ 6312607 (+)
LOC103039606 paip2b,LOC103039606,LOC107551309,LOC107674237,LOC108263850,LOC108426126 coding upstream 111918 6293110 ~ 6299551 (+)
LOC103042697 NA coding downstream 12624 6428242 ~ 6433128 (+)
LOC103035747 NA coding downstream 20103 6435721 ~ 6448166 (+)
LOC103036066 NA coding downstream 38829 6454447 ~ 6458321 (+)
trnam-cau_43 NA coding downstream 65940 6481558 ~ 6481629 (+)
lef1 lef1 coding downstream 233323 6648941 ~ 6728983 (+)
G214174 NA non-coding upstream 135546 6275714 ~ 6275923 (+)
LOC111195955 NA non-coding upstream 175749 6218386 ~ 6235720 (+)
G214134 NA non-coding upstream 298459 6112603 ~ 6113010 (+)
LOC111195966 NA non-coding upstream 323872 6086759 ~ 6087597 (+)
G214126 NA non-coding upstream 324968 6086241 ~ 6086501 (+)
G214227 NA non-coding downstream 53855 6469473 ~ 6470200 (+)
G214283 NA non-coding downstream 165676 6581294 ~ 6581733 (+)
G214290 NA non-coding downstream 216447 6632065 ~ 6632374 (+)
G214294 NA non-coding downstream 249593 6665211 ~ 6698418 (+)
G214304 NA non-coding downstream 340787 6756405 ~ 6756758 (+)
LOC111196031 NA other upstream 2401 6399076 ~ 6409068 (+)
G214175 NA other upstream 127101 6283781 ~ 6284368 (+)
G214006 NA other upstream 889794 5521184 ~ 5521675 (+)
LOC103034491 scoc,LOC103034491,LOC108434805,LOC107674238,LOC108263532,LOC103132857,LOC103463814,LOC106946201 other upstream 1051737 5349167 ~ 5359732 (+)
G213891 NA other upstream 1237373 5173069 ~ 5174096 (+)
pold4 NA other downstream 1395360 7810978 ~ 7813036 (+)
LOC103021346 LOC108412479 other downstream 1440544 7856162 ~ 7877118 (+)
G214773 NA other downstream 1695330 8110948 ~ 8111325 (+)
LOC103041196 LOC108443732,LOC107582026,LOC107601840 other downstream 2542681 8958299 ~ 9030598 (+)
sprn sprn other downstream 4159877 10575495 ~ 10583088 (+)

Expression


Co-expression Network