LOC103036975


Basic Information

Item Value
gene id LOC103036975
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 6387504 ~ 6398481 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007229481.3
TGTACTTATCCAAGACTTTCCCGGGCTCGTGTTGCTGCTGTTAGTGTTGGAGATCTATGGTTTTGATAGTTAGAGGAGTTTGAAGATTGGAATAACCGGTGTGCACGGCGTTTGGGTACTAAAATCGAGAATGGCGGTGACAGTGTCGAGTGACTTGTCTGTGAATGTAAGTGAAGATCAAGTTGTGAAGAAATTAACAGACAAACAGGAAGTCTTAAAAGAGAGCTTACGCAAAGGGGAGCCCAAAGCCATGGGGATTTGCCAAGTGATGGTGGGGTTTATGGTCATCTCCTATTCTATTCCACTGCTCTCTGCTGAGTTCACACAGCTGGTCTGGTTTGGTGTGCCGTGGTGGAGCGGCCTAACATTTGTTGCTGCAGGTACTATGGCTTTAGTAATGGAAAAACGCAACAGCATACAACTGGTCCTGGCATGCTTGCTAATCACAATAGCGGCTGCATTCATCTCCGTCCTTGCACTGGTCTTCTACTTCGTTGACCTTCTGAAGAACCCAGAACATAAATGCATGGAGAACCAGACGAATTTGCCCGAAAATACATGCGAACAACTTTATCATGGCAGTGTTTTCAGCAAAGACATGAAGTCAATTCTTATGTGCCTGACTGTAGTGCAGACTGGCATCTCCTCTGCTTTTTCATACATGCTGTACAGCGAACGGAAAAGGTTTATCCGCTACTCGCTTGTGAATTGAAGATCTCCTGTTTATCATATAACCTCGACGTTCAGGACTCCAATCTACATATGGCGCACATCTCTGCAACTTCTTTGTTATGTCTGTAATACATTGCTTCAACTGTACCTTAATACATTTACTGACCAAAAATATCACATCAAAAAGGAGTTGATGGATTGGAATGAAACTCTGTAAGTGTGAATGTTATGATGATATATGCAAGTGATTAAAACATTAGAGTGTAAGGAAAGGTTTATTAGGGGAAACTGCACAATAGCAAGGAGACTCTAGAATGCCAGTCTCAGCTGGTCCCATAAATGCTCTATTAACAAGAAATCTGGCGACTGGCAGGAcaagaaaagtgttttaatcCAGCAGAGAaattcctgggaaacccttatggtgtgtgggtgagcattattgTGCTAACAATTTCCAGTTGGAAGCCCCGCCATGAGAGCCAACATACTGAATGTGCTACACCTATTATTGAGCTCTTTGCGTCCCCCTGATCACTACTACAGGTGACTAGCTGATGTTTATGTTGGCTCCCCAGATCAAAGCTTTAGAAGTTAGGGTAGTGTGTTGTTACACAGCAAAGGCAGGATGGAAGCACTACATGAATGTTGTTGGATCCCAAACAGACAACACAGTTTCAGTCTGCAGTGGTACAGGTTTCTTGTTTTTATGACAtctctacaaaaaaaatcagtggtACCTAATCACCTAGATGGCAGGcaatttgtaaaaaaagatcatcctgcttctctcagttCAATGATGCATCCATATTAAAAGTCTGGGCATATTGTCTTTGAGTGtttgtagaggcatgtctagcagtccaCAATCTCTcatcaagaggtacactacctaaaAGTAGCCTCTGAGGTAATTTCTATAGGACAGTGGGAAAAGCACTATTAAGACCTTCTTGTGGAAAGTCTCACTGTCCTATAAGGCCATACCTGTTATCATTTACACAGACATAACTGCACGTCAAGGTTTGCAGACATtgtatgctttatttttttttgccaataagTGCATATTGCTTTATATATTGGACATTATGTATTTGCGGGTGTTTTAAGTTGTGTCAGtgttgtataaatgtattattactttttttatctgCATCAAAATCACATCAAAAGCAGGGCAGTTGTGAAAGGGTTAAATTTCAGCTGTAAAGAGAGCGCTGGATCTAAGAGGTCTGTTGTTTTTCATGCTTCCTTGAATGGACAGTGAGAGCTGTGTTGTGTTGAATCTTGCAGCCGCTGGCCTTTAACCTTCTGAAATTCTTCCAATTGTCCCTACAGTATTTCTCTCTCATAGCAACAGACATGCTAGGCTTTTCGGCCTCTGTGAGAGAAGACACTTACTTTTTCACTCTGCAGTACATTTAGAAGTGATGAAAAGCTTAGTAACCACTCACACAATGTTCATTTGTTAAAGCACAGCAGGATGAATTACTTCCCAGAACTGTGAGTGTTTCTAAGAATTGCAAGTGAAGAGTTTCCAAATTACATTACAGTATTATACTCTGTCATGCAGGAATTGTGTCTGAAGACTTTTGCTATGTCCCCTGGAAACTGAAGAACAGTGAACTGGGAGTAACCTGTCTGGTTGCATGGACAATTTAGCCAGACGCCACTGGTGACAATCATTAACATCCACTACACTTTTtaggtggtaatgccttttacAACATATTTTTGGTCCATCTGGCACCCATTATCAGGCCTCAATGTGACAATGTATGTTAACTTACCATGAGCACTCAGGCCAGCCTTCAACATAACTTTCTCAACTTTTTGTAATTTGGTAAATAATGGTCAATTACTCATCGTGAAGCTTTTAAATTGCTTGTGTGTAAAGTTCACTTTCAGCAGCatattacactaaaaaaaaacaatatcagtaaaaattgtatttatggAACCAAATTATTCAAATAATCAGTTTAATTAAAActtaatagaaaaatacaatttctTGACACATGCGTTATCTTTGCAAAATGTCTTTTGAATATCGCCAAACAAGTACtctaatgcatttataatgattCAGAATGTTGTTTTGATGTTAACTAAAGAATGTATGTTTGCCActtaaatgtttgtgttttttttatggaaatatGTTTATAAAGGTGAAATTATAAATTGAAA
>XM_022684506.1
ATGTACTTATCCAAGACTTTCCCGGGCTCGTGTTGCTGCTGTTAGTGTTGGAGATCTATGGTTTTGATAGTTAGAGGAGTTTGAAGATTGGAATAACCGGTGTGCACGGCGTTTGGACAATTGAGAGACACATGTGGAATTAcgtactaaacaaaaaaatgtttgaatgagctggagcttcacaactattgttcagcacctccaggaactcctacaagacgctgagaaaactattccagGTACTAAAATCGAGAATGGCGGTGACAGTGTCGAGTGACTTGTCTGTGAATGTAAGTGAAGATCAAGTTGTGAAGAAATTAACAGACAAACAGGAAGTCTTAAAAGAGAGCTTACGCAAAGGGGAGCCCAAAGCCATGGGGATTTGCCAAGTGATGGTGGGGTTTATGGTCATCTCCTATTCTATTCCACTGCTCTCTGCTGAGTTCACACAGCTGGTCTGGTTTGGTGTGCCGTGGTGGAGCGGCCTAACATTTGTTGCTGCAGGTACTATGGCTTTAGTAATGGAAAAACGCAACAGCATACAACTGGTCCTGGCATGCTTGCTAATCACAATAGCGGCTGCATTCATCTCCGTCCTTGCACTGGTCTTCTACTTCGTTGACCTTCTGAAGAACCCAGAACATAAATGCATGGAGAACCAGACGAATTTGCCCGAAAATACATGCGAACAACTTTATCATGGCAGTGTTTTCAGCAAAGACATGAAGTCAATTCTTATGTGCCTGACTGTAGTGCAGACTGGCATCTCCTCTGCTTTTTCATACATGCTGTACAGCGAACGGAAAAGGTTTATCCGCTACTCGCTTGTGAATTGAAGATCTCCTGTTTATCATATAACCTCGACGTTCAGGACTCCAATCTACATATGGCGCACATCTCTGCAACTTCTTTGTTATGTCTGTAATACATTGCTTCAACTGTACCTTAATACATTTACTGACCAAAAATATCACATCAAAAAGGAGTTGATGGATTGGAATGAAACTCTGTAAGTGTGAATGTTATGATGATATATGCAAGTGATTAAAACATTAGAGTGTAAGGAAAGGTTTATTAGGGGAAACTGCACAATAGCAAGGAGACTCTAGAATGCCAGTCTCAGCTGGTCCCATAAATGCTCTATTAACAAGAAATCTGGCGACTGGCAGGAcaagaaaagtgttttaatcCAGCAGAGAaattcctgggaaacccttatggtgtgtgggtgagcattattgTGCTAACAATTTCCAGTTGGAAGCCCCGCCATGAGAGCCAACATACTGAATGTGCTACACCTATTATTGAGCTCTTTGCGTCCCCCTGATCACTACTACAGGTGACTAGCTGATGTTTATGTTGGCTCCCCAGATCAAAGCTTTAGAAGTTAGGGTAGTGTGTTGTTACACAGCAAAGGCAGGATGGAAGCACTACATGAATGTTGTTGGATCCCAAACAGACAACACAGTTTCAGTCTGCAGTGGTACAGGTTTCTTGTTTTTATGACAtctctacaaaaaaaatcagtggtACCTAATCACCTAGATGGCAGGcaatttgtaaaaaaagatcatcctgcttctctcagttCAATGATGCATCCATATTAAAAGTCTGGGCATATTGTCTTTGAGTGtttgtagaggcatgtctagcagtccaCAATCTCTcatcaagaggtacactacctaaaAGTAGCCTCTGAGGTAATTTCTATAGGACAGTGGGAAAAGCACTATTAAGACCTTCTTGTGGAAAGTCTCACTGTCCTATAAGGCCATACCTGTTATCATTTACACAGACATAACTGCACGTCAAGGTTTGCAGACATtgtatgctttatttttttttgccaataagTGCATATTGCTTTATATATTGGACATTATGTATTTGCGGGTGTTTTAAGTTGTGTCAGtgttgtataaatgtattattactttttttatctgCATCAAAATCACATCAAAAGCAGGGCAGTTGTGAAAGGGTTAAATTTCAGCTGTAAAGAGAGCGCTGGATCTAAGAGGTCTGTTGTTTTTCATGCTTCCTTGAATGGACAGTGAGAGCTGTGTTGTGTTGAATCTTGCAGCCGCTGGCCTTTAACCTTCTGAAATTCTTCCAATTGTCCCTACAGTATTTCTCTCTCATAGCAACAGACATGCTAGGCTTTTCGGCCTCTGTGAGAGAAGACACTTACTTTTTCACTCTGCAGTACATTTAGAAGTGATGAAAAGCTTAGTAACCACTCACACAATGTTCATTTGTTAAAGCACAGCAGGATGAATTACTTCCCAGAACTGTGAGTGTTTCTAAGAATTGCAAGTGAAGAGTTTCCAAATTACATTACAGTATTATACTCTGTCATGCAGGAATTGTGTCTGAAGACTTTTGCTATGTCCCCTGGAAACTGAAGAACAGTGAACTGGGAGTAACCTGTCTGGTTGCATGGACAATTTAGCCAGACGCCACTGGTGACAATCATTAACATCCACTACACTTTTtaggtggtaatgccttttacAACATATTTTTGGTCCATCTGGCACCCATTATCAGGCCTCAATGTGACAATGTATGTTAACTTACCATGAGCACTCAGGCCAGCCTTCAACATAACTTTCTCAACTTTTTGTAATTTGGTAAATAATGGTCAATTACTCATCGTGAAGCTTTTAAATTGCTTGTGTGTAAAGTTCACTTTCAGCAGCatattacactaaaaaaaaacaatatcagtaaaaattgtatttatggAACCAAATTATTCAAATAATCAGTTTAATTAAAActtaatagaaaaatacaatttctTGACACATGCGTTATCTTTGCAAAATGTCTTTTGAATATCGCCAAACAAGTACtctaatgcatttataatgattCAGAATGTTGTTTTGATGTTAACTAAAGAATGTATGTTTGCCActtaaatgtttgtgttttttttatggaaatatGTTTATAAAGGTGAAATTATAAATTGAAA

Function

GO:

id name namespace
GO:0019538 protein metabolic process biological_process
GO:1901564 organonitrogen compound metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007229481.3 False 2871 mRNA 0.39 7 6387505 6398481
XM_022684506.1 True 2995 mRNA 0.39 8 6387504 6398481

Neighbor

gene id symbol gene type direction distance location
trnak-cuu_9 NA coding upstream 61447 6325985 ~ 6326057 (+)
LOC103038786 LOC103368813 coding upstream 63274 6314852 ~ 6324230 (+)
LOC103039100 NA coding upstream 74897 6302716 ~ 6312607 (+)
LOC103039606 paip2b,LOC103039606,LOC107551309,LOC107674237,LOC108263850,LOC108426126 coding upstream 87953 6293110 ~ 6299551 (+)
LOC111195932 NA coding upstream 203328 6180250 ~ 6184176 (+)
LOC103036371 NA coding downstream 12988 6411469 ~ 6415618 (+)
LOC103042697 NA coding downstream 29761 6428242 ~ 6433128 (+)
LOC103035747 NA coding downstream 37240 6435721 ~ 6448166 (+)
LOC103036066 NA coding downstream 55966 6454447 ~ 6458321 (+)
trnam-cau_43 NA coding downstream 83077 6481558 ~ 6481629 (+)
G214174 NA non-coding upstream 111581 6275714 ~ 6275923 (+)
LOC111195955 NA non-coding upstream 151784 6218386 ~ 6235720 (+)
G214134 NA non-coding upstream 274494 6112603 ~ 6113010 (+)
LOC111195966 NA non-coding upstream 299907 6086759 ~ 6087597 (+)
G214126 NA non-coding upstream 301003 6086241 ~ 6086501 (+)
G214227 NA non-coding downstream 70992 6469473 ~ 6470200 (+)
G214283 NA non-coding downstream 182813 6581294 ~ 6581733 (+)
G214290 NA non-coding downstream 233584 6632065 ~ 6632374 (+)
G214294 NA non-coding downstream 266730 6665211 ~ 6698418 (+)
G214304 NA non-coding downstream 357924 6756405 ~ 6756758 (+)
G214175 NA other upstream 103136 6283781 ~ 6284368 (+)
G214006 NA other upstream 865829 5521184 ~ 5521675 (+)
LOC103034491 scoc,LOC103034491,LOC108434805,LOC107674238,LOC108263532,LOC103132857,LOC103463814,LOC106946201 other upstream 1027772 5349167 ~ 5359732 (+)
G213891 NA other upstream 1213408 5173069 ~ 5174096 (+)
tbc1d9 tbc1d9,LOC107598515,LOC107594295 other upstream 1797052 4510939 ~ 4590452 (+)
LOC111196031 NA other downstream 595 6399076 ~ 6409068 (+)
pold4 NA other downstream 1412497 7810978 ~ 7813036 (+)
LOC103021346 LOC108412479 other downstream 1457681 7856162 ~ 7877118 (+)
G214773 NA other downstream 1712467 8110948 ~ 8111325 (+)
LOC103041196 LOC108443732,LOC107582026,LOC107601840 other downstream 2559818 8958299 ~ 9030598 (+)

Expression


Co-expression Network