LOC103043775 (LOC103043775,LOC103045808,LOC108421350,LOC108263479)


Basic Information

Item Value
gene id LOC103043775
gene name LOC103043775,LOC103045808,LOC108421350,LOC108263479
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 25268092 ~ 25276976 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007237993.3
AGTAGTTTTTGCTTCCTCCTTGAGACTTTGGCTTTTGCGTGCAGTGTGATGTATtttattctccctctctctttcctgtgATAACAGTAAAGCATGGCTACAGCAGGGAAGgtgATCAAATGCAAGGCAGCTGTTGCCTGGGAGCCCAACAAACCGCTGGTGATAGAAGAGATTGAAGTGGCTCCACCTCAGAAGGATGAAATACGAGTCAAGGTCGTAGCTACAGGTTTGTGTCACACAGACCTGTACCACCTATTTGAGGGGAAAGAAGGCTTCCCTACTGTCCTGGGCCATGAGGGAGCTGGTGTGGTGGAGAGTGTTGGACCTGGGGTTACTGAGTTCAAACCAGGTGATAAGGTCATCCCCCTCTGCGCTTCTCAGTGTAATGAGTGCAGGTTCTGCAAAAGCTCTAAGACTAACCTGTGTGAGAAAAGCTGGTCAACTAATCCATGCCCTACGATGGCAGGCCCTGTCACACGCTTCTCATGTCATGGTCAGCCAGTCCTGCAGTTTGCGTGCACCAGTACGTTCTCAGAGTACACGGTCATGAACAAGATTGATTTGGCAAAGATCCATGATGATGCCCAACTTGATCGTGTCTGTTTGTTGGCATGCGGCGTCTCCACTGGCTATGGAGCTGCCATCAACAGTGCCAAGGTCCAGCCAGGatcagtgtgtgcagtgttcgGGTTGGGTGCAGTGGGTCTCGCTGCAGTCATGGGCTGTAAGAGTGCTGGAGCCTCCAGGATCATTGCTGTGGACATCAATGAGGAGAAGTTTGAGAAGGCCAAGATCTTTGGTGCCACTGACTTTGTGAACCCTAAAGCACACAAGAAACCAATCAGTGACGTTCTGATTGAAATGACTGACGGAGGAGTGGATTATTCACTGGAGTGTGTGGGAAATGTTGAGCTAATGAGGAGTGCATTGGAGTCATGTGTTAAAGGCTGGGGAGTGAGCGTGATTGTTGGCTATACAGATCTTCATGACTTCGCTGCTCGGCCCATTCAGCTAATTGCTGGGAGAACTTGGACTGGAAGTCTGCTTGGAGGATACAAGATGAAGGATGACGTTCCAAAGCTTGTCCTGGACCACATTGCTGGTCGTATAAAGCTGGATGAGTTTGTGACACACACTATGAATCTGGAGCAAATCAATGACGCCATTGAGCTGATGAAGTCTGGGAAGTGcATTCGTACTATCATCAATATGTCCAAATAAGAAGTCAACAGCAAGACAACAATCATAACTTtgtaaattacacacacaaatcatTCGTTTTTGCTCTGTGCTCTGCTGGGTATTCTTTAggttgtagtattttttttaaaataagatattgcAATATCTTTAGCAGTATGTCATATGGTATCCATCATAcaatctgaaattgaaataaatctgcAGGTTACAGTACTACTCCTGTTATGCCAGTTTTTCATCATATTTTCACTgacaatataataaacacatttgaaataaatgttttataaatca

Function

NR:

description
alcohol dehydrogenase 1-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K00121 frmA, ADH5, adhC; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007237993.3 True 1497 mRNA 0.45 9 25268092 25276976

Neighbor

gene id symbol gene type direction distance location
LOC103044566 NA coding downstream 8413 25252832 ~ 25259679 (-)
LOC103045808 LOC103045808,LOC108421350,LOC108263479,LOC107747568,LOC103043775,LOC107666441,LOC107585225,LOC107733735,LOC105896540 coding downstream 18870 25241544 ~ 25249222 (-)
enpep NA coding downstream 52241 25194787 ~ 25215851 (-)
lamtor3 lamtor3 coding downstream 84467 25178632 ~ 25183625 (-)
LOC103032648 LOC103032648,LOC108441777 coding downstream 556432 24710304 ~ 24711660 (-)
LOC103044089 LOC103044089 coding upstream 4946 25281922 ~ 25290577 (-)
fam241a LOC107695033,LOC107585232,LOC107733699 coding upstream 22244 25299220 ~ 25309273 (-)
LOC103022475 NA coding upstream 340935 25617911 ~ 25623102 (-)
nsd2 whsc1,LOC103458261 coding upstream 347671 25624647 ~ 25640231 (-)
fgfr3 fgfr3 coding upstream 473891 25750867 ~ 25828646 (-)
LOC111196007 NA non-coding downstream 92006 25168637 ~ 25176086 (-)
G219218 NA non-coding downstream 95451 25172387 ~ 25172641 (-)
G219209 NA non-coding downstream 110401 25157036 ~ 25157691 (-)
G219130 NA non-coding downstream 147505 25120372 ~ 25120587 (-)
G219072 NA non-coding downstream 233130 25034737 ~ 25034962 (-)
G219245 NA non-coding upstream 44132 25321108 ~ 25321955 (-)
LOC111196011 NA non-coding upstream 113083 25390059 ~ 25397490 (-)
G219344 kiaa1109 non-coding upstream 327457 25604433 ~ 25606058 (-)
G219351 NA non-coding upstream 365638 25642614 ~ 25653393 (-)
G219353 letm1 non-coding upstream 377179 25654155 ~ 25662895 (-)
LOC103046115 lrit3 other downstream 41842 25218149 ~ 25226250 (-)
LOC103045183 emx1,LOC103045183,LOC108441775,LOC108263581,LOC107567848,LOC107678523,LOC107733702,LOC107690190,LOC102233543,LOC103458176,LOC103150078,LOC107097582 other downstream 567443 24683237 ~ 24700649 (-)
G218781 NA other downstream 1211215 24055525 ~ 24056877 (-)
G218720 LOC108444338,LOC104946244,LOC101064687,LOC103387332 other downstream 1410585 23850963 ~ 23857507 (-)
LOC103032322 eif4e1c,if4e,LOC103032634,LOC108444323,LOC107690176,LOC107582514,LOC103032322,LOC108444348 other downstream 1418292 23835779 ~ 23849800 (-)
G219510 NA other upstream 1195652 26472628 ~ 26474247 (-)
zbtb18 zbtb18,LOC107666464,LOC107587843 other upstream 1461828 26738804 ~ 26757592 (-)
G219671 NA other upstream 1550052 26827028 ~ 26827527 (-)
epas1 epas1,epas1a,LOC102794480,LOC108430450,LOC107739260 other upstream 2837950 28114926 ~ 28302444 (-)
G220285 NA other upstream 4283083 29560059 ~ 29563970 (-)

Expression


Co-expression Network