ntpcr (ntpcr)


Basic Information

Item Value
gene id ntpcr
gene name ntpcr
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 32289852 ~ 32296881 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007238454.3
ACCAGCAGTGCGCATGCGCATGAAATACCCACACAGGAAGTTGTTTTGCAGCTGTAAATAGAGCCATGCTGAAGCACGTGTTCCTCACAGGCTCTCCaggcgTGGGGAAAACCACGCTAGTGCAGGAAGTGTGTAAGTCGCTGGTTTCTGCAGACGTGAGCGTCCACGGCTTTTACACAGAAGAgctgagagagagggggaagagGGTGGGCTTTGATGTCGTGAGCCTAACAGGAGAGAGAGGACCCCTGTCCAGAGTCGGGACTGATATCCCGGCTGGCAGGCGTGAGTACAGGGTCGGCCAGTATGTTGTTGACCTTCCCTCGTTTGAGAATGTTGTTTTGCCACTTTttcaaaatGTAGGTAAGGGCAGTAGAAGTTTGTTTATCATAGATGAGATTGGAAAGATGGAACTCTTCAGTCAAGCATTTATTCGTGCTGTGAGACAAGCGCTGGACAACTCGGCCTGTTCCATCCTGGGAACCATTCCCGTTCCTAAAGGAAAACCCCTGGGTCTGGTAGAGGAGATTCGAGCAAGGAAGGATGCTAAAGTCTTTATTGTTACAAGGGAGAACAGAGATACTATTATTAGTGAAATTTTGGTTGCAGTAAAGGAATGTCTGAAATAAACAACATGCCAAAAGAACAGCGGCCAACAGtcaacctttttttgtttgtttattaaaacatgtttttgtaaCATTCTAATCTTCACATTAGAGAATAGTGTTCTTGCTCTCTTCTGCCTGTTATTTCTTAGAACAATGTAGCactttgtaatatattttaaaaaaaaaattgcaaagtgAGCATGTATTATTTAATGTACTTTCAAGGTGGTTTTCTTTGATAAGTTTTTGAGGCATTGCatgtaatgtaaattattttgatCTGTTGCTGATGTAAACAGAGatatttgtgcatttttgtAGCAGTTATTAAATTCTGACTTCAACAGTTGGAGGGAGAGAAGAGATTTTTCTTATGTATCCTCATGTAACTTTTATATCATGTAACATATTTTTTGCGCAGTAAGGCTaaaaataaacatctattttctggtc

Function

symbol description
ntpcr Predicted to enable ATP binding activity and nucleoside-triphosphatase activity. Orthologous to human NTPCR (nucleoside-triphosphatase, cancer-related).

NR:

description
cancer-related nucleoside-triphosphatase

GO:

id name namespace
GO:0016311 dephosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0017111 nucleoside-triphosphatase activity molecular_function
GO:0098519 nucleotide phosphatase activity, acting on free nucleotides molecular_function

KEGG:

id description
K06928 NTPCR; nucleoside-triphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007238454.3 True 1064 mRNA 0.41 5 32289852 32296881

Neighbor

gene id symbol gene type direction distance location
c1d c1d coding upstream 764509 31522285 ~ 31525343 (+)
psap psap coding upstream 834022 31443031 ~ 31455830 (+)
mrps6 mrps6 coding upstream 853323 31430280 ~ 31436529 (+)
trnak-cuu_13 NA coding upstream 861540 31428240 ~ 31428312 (+)
trnag-gcc_5 NA coding upstream 867030 31422752 ~ 31422822 (+)
golga4 NA coding downstream 425224 32722105 ~ 32776771 (+)
itga9 itga9,LOC107679186,LOC107688464 coding downstream 482663 32779544 ~ 32905463 (+)
LOC111196032 NA coding downstream 614900 32911781 ~ 32921578 (+)
fbln7 fbln7,LOC107679196,LOC107754577,LOC107688955,LOC107733340,LOC107585467 coding downstream 649535 32946416 ~ 32973568 (+)
acoxl acoxl coding downstream 813078 33109959 ~ 33210737 (+)
G220862 NA non-coding upstream 52300 32230910 ~ 32237552 (+)
G220859 NA non-coding upstream 102686 32184953 ~ 32187166 (+)
G220851 NA non-coding upstream 192500 32097084 ~ 32097352 (+)
G220830 NA non-coding upstream 265951 31990028 ~ 32023901 (+)
G220828 meis1,LOC108423396,LOC107582672,LOC107717834 non-coding upstream 329552 31953861 ~ 31960300 (+)
G220879 NA non-coding downstream 2451 32299332 ~ 32299534 (+)
G220881 NA non-coding downstream 5720 32302601 ~ 32303879 (+)
G220882 NA non-coding downstream 7414 32304295 ~ 32305661 (+)
G220891 NA non-coding downstream 42144 32339025 ~ 32340292 (+)
G220894 NA non-coding downstream 47896 32344777 ~ 32391273 (+)
map10 NA other upstream 1002 32284577 ~ 32288850 (+)
G220800 NA other upstream 551656 31736897 ~ 31738196 (+)
G220610 NA other upstream 1337911 30949012 ~ 30951941 (+)
G220336 NA other upstream 2496356 29787939 ~ 29793496 (+)
LOC103047316 NA other upstream 2649451 29636061 ~ 29640401 (+)
LOC103027057 fbxo11a,msh6,LOC108413220,LOC107725019,LOC107588452,LOC107679165,LOC107733352,LOC108430631 other downstream 205893 32502774 ~ 32578552 (+)
LOC103038412 LOC108430255,LOC107679129,LOC107585442,LOC107688640 other downstream 316593 32613474 ~ 32677285 (+)
bcl2l11 bcl2l11 other downstream 916747 33213628 ~ 33232791 (+)
G221292 NA other downstream 1147236 33444117 ~ 33444721 (+)
G221390 ate1 other downstream 1865700 34162581 ~ 34183237 (+)

Expression


Co-expression Network