zfand4 (zfand4)


Basic Information

Item Value
gene id zfand4
gene name zfand4
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 23662698 ~ 23691895 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007240289.3
ATCACTGCGGGTCTTCCCAGACCGATTCCGTTGCTCCCGTCTCCTGGAGAAACGGGGAGCGGGGCGCTTCATGAAGAGGCCTCGGACCGCCCAGCAGGAAAACAATGGTCACAGCTGGGTTTTTGTTTATTGACTGGGACGTCCTCCGCCGGATCCTGCTCCGCTGGCATTGACCGCTCTCTCCTCTGCTATTAGTCTCCGgatctcctcctccttctccctcCTCCGGTGGTGGTGATACTGCTGATTTACAGAATGTAGGCCTCTGTGAGGGCATGATGAGTGGCCCAGAGGACAGTGGTGACTCCACAGCCCTCACTCCACCTTGGGCAGGTTTAACCTCAATCTACCCCTGAGTGCCTGCCTTCCAGTCCCCACAAACATGGCCGACAAGAGAGAGCCACCCTTCTTCAATGATGATAACTTTGGGCTTGTCCACTACAAACTGCCCTTCTATGAGACCATGGAGCTGTTTATAGAGACTCTGACCGGGACCTGCTTCCAGCTGCGGGTTTCTCCCTTTGAGACTATCATCTCGGTCAAAGCCAAGATTCAGAGGCTGGAGGgTATCCCTGTTGCTCAGCAGCATCTGATCTGGAATAGTCTGGAACTTGAAGACGAGTACTGTTTGCATGACTACAGCATTGCAGAAGGCTGCACCCTCAAGCTGGTCCTTGCCATGAGAGGTGGGCCTATCAACACCAGACGAGTAACAGTGGAAGACTCTGTGAAGGAGACCTCTGACTGCTTGGATAAAAGAAGTGATGAGTTGTGGGAAAAGTCTCTGTCCAATAAACAGGTGACTTTTCTGGTGTACAGAGAGGGTGACCAGCTCAACTTCTTCCGGGTTGTGGATCGTGGAGATGGCACTCTCACGCCTGTTTCTGAGTCGCTCAGTGGTGGTTCTATGCGCAACATGTACGCtgaagaggaagaggatggTGTGAGCTCGTCTTCTGCTCAGCTGACTTTGGAGAATTCAATAACCATGAACAAGATGAAGCTTCTTAAATCCAAGATGGAGAACATGAACCTCAACAAAAAGCCCAAGAAGACTGCTAAGTTGAAAGTCAGGCCACCGGCTGGCCCCAGGCCTTTCAGTAGCTCTCTCGGCACCGTCCGCCACCACCGAATGTTCCGGGTCCTTCCTCAGATAGGCCACGCCTCTGCAACAACACATCTACCTCCAGTTGGTGACCAGCAGCAACCTGCAACCCCTTCCTCTGCTGCCGGCCCTTACAGCACGCCTCTCGCCCCTCACCGGAGTCCTACCTCTGGCAGAGCTATTCCCTCACTGGCAGCTTCTAGCACTTACGTGCTTCAGGAGGAGGAGCCATGGAAAAATCCCACCCCTCGGAAGATTAGATTGCCTCCTAAAGTGTCCAGGCTGGATGTGGGAGGGTCTAAGGTTATAAGAGACTGTGTACACCCGCCTTTCTCTGTCCTGTCTGCTCAACATGAGGCAGATCCCCAGAGTGATCGAATAACATTAGTGGAGGATGCGGTTGTGATGGAGCCTCCTAAACCTGTTTCCTTCAACAGCTTGCTTCCAGAACCCCTGAGCCTGGATGTGTCCACTCAGCGAGACGCCAGCTTGGACTCTTTAGGAGCTGTGGCTGAGTCTATGGCCGCACCGACATTGCTGTCTCAAGCAGTGGGTTCAGACTCTATCAGTACATGGCCTATAGGCACTAAGACACTGCAGTCTCAATCTGACAGTGACACATGGGCTATAGGCACCAAAACACTTCAATCCCAACCTGTGCTAAATCTCCCATCTGAGCCATTAACCCCTCCACGCATGCCTCAGCCCTTTGAGTTCACAGGGGCTTCCCTGCGGGCCAGCCCTTCTCACACACTTCTCAGATCTCTCGACAGTCCTCCTGTACCACCTCGCTCTCCTCCGCAGGCTGCTGCTCTCTGTGGCATCAAAGTCAGCTCTCCTGGCAAGCGGACAGAGGTGATGTCCAAAAGCGAGGCGCGGGACATCACCAAGATGGCCAACAAGGCCTCCAAAGAACTGCTGGGCTGTGTGAGTAACACGGAGTTGCTGGCCTCACTGGCTGGCACTGGGGGTCGAGAGTGTATGGCAGGAACACGTACACTGGGCAGACTGTGTGGTGCTTCTGCTCCTCTGCCTGCTAACATCCATCTGCTCCAGGAGGACCTGCTGCGCAGAATCAACCCGCTGCAGAGAGCAGTCGTGTACACGCCCTCAGGAATGCTGGGCTCTTCGAGTGGATCCTCCAGTTCAATAAAAAGACAAGGCACTCCAACATATCACCTCCCTCCTGTGAAAGCCCCTGTTGGCTCAAAAAAGAAGACTTCAAAGCACTGCTTCCTGTGTGGGAAGAAGACTGGGCTAGCCACCAGCTATGAGTGCAGGTGTGGCAACAACTTCTGCTCCACTCACCGCTATGCAGAGACCCATGACTGCACCTACGACTACAAAAATGCAGGACGCCGCTTTCTACAGGAATCGAACCCTATTATTAGTGCACCAAAGCTGCCCAAAATATGAGAGCTGGTAATGGACGATACAAGAAGGAATAATAGACCCATTAAAATCCATATAAAGATCAAGAACTTTATCACCAGTGTGTGCTTTTATCACCATGTTTGCTTAACCGTAAAGGACCCTATGTGTAGAAACAGAGCAAAAAATAGCACACgcttttttccttttgtttccGAGCAGTTACTTTTTTGCACAAATGTGAAAACATTACTATTTCTTCTTTACTGTATGTTTTCTTCACGTATtgtaagtaaaacaaaaaaagaacctGGCATGAGAAATACGTTGATTTAAATAAGTTTCCATTACGCTAAAATCTTTCGGATGAGCATAATGCATGACTTCATCaacatatgtatgtgtgtatgtgtgtgtatatatacagtccCATGCAAATGTTTGGGCACCCTTGGCCAAATGAAACAATTTGTGTATTTTCACCACAGCCTCCATCACAAACCAAATACGAATACTAGTGCACAATTActctacattttattacataacataCAAGAATATATAAAGTAATTAATAAAGGTAATAGATGGTAATTTGATTTAGCTGACATCTAGTGACATGTCTCGTGATTTGCACAATTTGTATATCAAAGGCTAAGACTACGTCCAATACCTAGAGTACCCAAACTTTTACACAGAACATGATTTTTGAAATATAAAGGACAGGGTAACTATTATTTGGTGATAGTAGTTTTCTTTAGCCACAGAGGGTGTGTGTTCTAAAAACACACAGCCTCTGTGTCATCTGACCAAGGATGCCCAAAATGTGTATgagaatgtataaaaatatatgtatttttagttgtttttttataatgggAGGGATGACGTTATAAGGCAAGTCTTTGAGAGATGCACTTTAGGAATCATGAATATTTCATGGGACAATGAGGAGATGATTTATGTGTTTTGTAAGAAGTGTTCTGTTCTGATTGTTTGAGTGTCCCAGTATTCAACAGTtcatctgtctttttctctgaaTTGGTTCATTTTAGACATGCAGCACTCTACTCAACATCATAGCAGGTACTACACACATATGATAATAGAAAATACTGTGTCTGTCTAGTGTTGGGTTTTCCTTTGAATGCAATTATGCAGGTTATACATGTTTGTCAGCTTGTAAGCACCACTATGCAGTACAGCCACGTAGCATTCTTTACTATTTTCAGAAGGGCTTGCTGTGGGACGATGTGGGCACTTGGGTGGAAGCTATTTTGGAAGGTTTCTTTTttactataatttttttattattatttcacagCACATTCAGCTTAAAGTTGTTGCTTAAAGTTTTCAATATTTATTTGGGGATCCAACTAATAAATATACCTGTGTTTCCTTAGATGTGT

Function

symbol description
zfand4 Predicted to enable zinc ion binding activity. Orthologous to human ZFAND4 (zinc finger AN1-type containing 4).

NR:

description
AN1-type zinc finger protein 4

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K12163 ZFAND4, ANUBL1; AN1-type zinc finger protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007240289.3 True 3887 mRNA 0.47 11 23662698 23691895

Neighbor

gene id symbol gene type direction distance location
LOC103037680 vdac2,LOC108444242,LOC107747461,LOC107582506 coding downstream 216573 23438656 ~ 23446125 (-)
lrmda cunh10orf11,c3h10orf11,c13h10orf11,LOC103041229,LOC107747465,LOC107678567,LOC107708444,LOC105909757 coding downstream 376249 22846282 ~ 23286449 (-)
LOC103042035 zgc:110045,LOC108444131,LOC107582498,LOC107721227,LOC107678543,LOC107708438,LOC108262845,LOC107698144 coding downstream 1267778 22379123 ~ 22394920 (-)
vwc2 vwc2,LOC107589538,LOC107678488,LOC107698155,LOC107721217 coding downstream 1303085 22328143 ~ 22359613 (-)
spata48 NA coding downstream 1365926 22284552 ~ 22296772 (-)
washc2c NA coding upstream 1361 23693256 ~ 23708270 (-)
LOC111195939 fam21c,LOC107678570,LOC107589565 coding upstream 17390 23709285 ~ 23714358 (-)
alox5 alox5,alox5a,LOC107747471,LOC107708393,LOC107690200,LOC107582511,LOC107678516 coding upstream 31404 23723299 ~ 23742646 (-)
slc25a16 slc25a16,LOC107678603,LOC107708451,LOC107747470 coding upstream 58239 23750134 ~ 23762804 (-)
LOC103041217 mat1a,LOC107582520,LOC107678534,LOC107733750,LOC107708460,LOC108263526,LOC105911600,LOC107570529 coding upstream 338979 24030874 ~ 24040368 (-)
G218602 NA non-coding downstream 195654 23459492 ~ 23467044 (-)
G218527 NA non-coding downstream 819484 22843001 ~ 22843214 (-)
G218519 kcnma1 non-coding downstream 844594 22809819 ~ 22818104 (-)
G218448 anxa11,anxa11a,LOC108263209 non-coding downstream 1210762 22441756 ~ 22451936 (-)
G218441 NA non-coding downstream 1243325 22416898 ~ 22419373 (-)
G218698 NA non-coding upstream 66536 23758431 ~ 23760825 (-)
G218703 NA non-coding upstream 91923 23783818 ~ 23784105 (-)
G218697 NA non-coding upstream 93472 23785367 ~ 23786980 (-)
G218709 NA non-coding upstream 123976 23815871 ~ 23816669 (-)
G218706 NA non-coding upstream 130588 23822483 ~ 23824595 (-)
march8 march8 other downstream 5712 23454175 ~ 23656986 (-)
G218545 NA other downstream 816493 22844833 ~ 22846205 (-)
G218329 eif5,LOC107589547 other downstream 1606205 22051889 ~ 22056493 (-)
LOC103022835 NA other downstream 1617586 22038423 ~ 22045112 (-)
G218240 NA other downstream 1807557 21851372 ~ 21855141 (-)
LOC103032322 eif4e1c,if4e,LOC103032634,LOC108444323,LOC107690176,LOC107582514,LOC103032322,LOC108444348 other upstream 143884 23835779 ~ 23849800 (-)
G218720 LOC108444338,LOC104946244,LOC101064687,LOC103387332 other upstream 159068 23850963 ~ 23857507 (-)
G218781 NA other upstream 363630 24055525 ~ 24056877 (-)
LOC103045183 emx1,LOC103045183,LOC108441775,LOC108263581,LOC107567848,LOC107678523,LOC107733702,LOC107690190,LOC102233543,LOC103458176,LOC103150078,LOC107097582 other upstream 991342 24683237 ~ 24700649 (-)
LOC103046115 lrit3 other upstream 1526254 25218149 ~ 25226250 (-)

Expression


Co-expression Network