arg2 (arg2,LOC107675544)


Basic Information

Item Value
gene id arg2
gene name arg2,LOC107675544
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035921.1
NCBI id CM008324.1
chromosome length 46505145
location 38648585 ~ 38658342 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007247521.3
CAGAAGAGCGGCGAAAGCAGCTGCAGCTTCAGGACCTGAGTGGGTTAACTATTTTTTAGGAGGGGGGGTGGAGCAGGTcttcatgaatattcattagCTGAGAGCTCCAAAGCCAGCCTCCCGCCCAGTTTCAGCATCAGTCTGAgaggagagaagcagagaggagCAGAGGCTGAACTCGCTTCTACATCTTTTTGAACTTATTTAACGTTAGTTAAGCTAGGTTTAAGTTTTAACCACTATAATGGCGCTGAGAGGATCTCTCTCCCGCTTCCTTCAGTCAACGCTGAGCTCCTGTCAGCACAGCCGGGCTCACTCTGTGGCGATTGTAGGAGCTCCCTTCTCTAAAGGACAGAAAAGAAGAGGAGTGGAACACGGGCCCAAAGCCATCCGAGACGCCGGCCTGGTGGAAAGACTGGctaatttggAATACCCAGTTCATGATTTCGGAGACCTGAGCTTCCAGCATCTGGAGAAGGATGACCACTTCATGCATGTTCCCTATCCCCGTACAGTTGGACGGGCCACTCAGCTGGTATCTGGGGCCGTGAGCAGGGCGGTGGAAGCTGGACACACTTCAGTCATGCTTGGAGGAGACCACAGCCTGGCCATTGGTTCAGTTGAGGGTCACGCCCAGCAGTCTCCCGACCTTTGTCTCATCTGGGTTGATGCACATGCTGACATTAACACCCCCCTGACCTCACCTTCTGGAAATCTCCATGGCCAGTCTGTGGCATTCATGCTTAAAGAGCTGCAAGACAAGATGCCAGATGTTCCTGGGTTCTCCTGGATGAAACCCTTTCTCAAAGCTAGAGATCTGGTCTACATTGGCCTAAGAGACGTGGACCCAGGAGAGCATGTCATTCTGAAGAGCCTGGGAATCCAGTACTTCTCTATGCGGGACATTGACAGAATGGGTATTCAGAGAGTTATGGAAGTTACTCTGGATCATCTTTTGGCAAGGAAACCACGTCCCATCCACCTGAGCTTTGACATCGATGCATTCGATCCAGCTCTGGCCCCTGCCACCGGAACTCCAGTCAACGGCGGACTGACCTACAGAGAGGGCATTTATATCACAGAGGAAATCCATAACACAGGTCTGCTGTCAGCGATGGACCTGGTTGAGGTAAACCCCACGTTGGGAGGAGGTCCTGAAGCAGTGGAGGCTACAGCTACCCTTGCAGTGGACGTTATTGCCTCATCTCTTGGTCAGACGCGGGAGGGTGCACACGTCTCGCTTCAGGAGATTCCTGCTCCCAAAGAGGACACAGAACAGCTCAGACTGTAGAAAAACAGCTCTCACTTAAGGACTTGGAtggcaaaaaaatgaaaaccacTCAGCATtccaaagtttgaacacacaaaaacaatttGCCCAAAACTTGGTGCACAGGAGTGAGCGTTATCCAGTTAAGACCACGCAGCGATGGGTTTGAGAAGAGGAAAGTGCTACCCTCGGACAATAAAAAGTTAGAGAAGCCTCTACATAGAGAATTAGCATGAACCTACGGGACTGACCGTCTGATCGTCTCACACCAGCTAACAAACCCTAATGAAACAGTAGCATCAACAGAATCAATGTTGCCTTGATACTAGCACAGTTTAGTACTGGTACTTGGAATGTACATTGATCCTGGACTCAGTAAATAACTTCTTTACACTTCTTACTGGCTTAGTTGTATTTGTTGATAACCATGTATGATGCTGGccacttattttactgcatttacaACCTACAATAATACATGCTAATGTTGGTACTCAATTTCTACACTTTATTAATGTAAACACATCAGCCCTAATCTGTGCATCCCTATACTGTCCTTctggtgtttgtgtttaattcaGTCTAGCTGAATATTATTAATCATGTGatttactttttaaactgtgGAATTGGGCTTTCCAGTCAGAAATGATACTGTCCTCCATCATGCATAACTACTGAGTGactgcgtaaaaaaaaaaaaaagagtaagaaggaaaaaaaatgtgcgTTTATTAAACGTTTTGTCTTCCGCAACCTTCGCTCGGAACTGGAAAAGATCAGCAGCAGACAGCCCAGTTTTATTATTGACATGTTTGCACTTTTGGACCAGTTGTggtttgaatgtattttatttagcatttgtatttttcagtcattttgtttgttattattgtttttgtgttttaactgTATATTCGTCTATTCTAGCTGTAGCTGAATAACGAGTTTTAAGTAGATGTAACTTTTCCTTTTACTAAAAGAACCGAGTTCTAAACAATATGTTAGAACTTACTTTAAAAGTATGAACTACTGATTTTCTTCACAATGCCCGCCTTTATAATGCTATAAAAGCACCACATCTGATTCACTGTCTTTGtcctttttatgtctttatagTAACGTTTCTTTCGAACcgttgttttctgttttgaaaAACTGTTGTATTTATGTAATAAACTGCTGAACTGTTGTAAACTC

Function

symbol description
arg2 Predicted to enable arginase activity and manganese ion binding activity. Predicted to be involved in arginine catabolic process to ornithine. Predicted to act upstream of or within arginine metabolic process and urea cycle. Predicted to be active in mitochondrion. Is expressed in axial mesoderm; central nervous system; forerunner cell group; and integument. Human ortholog(s) of this gene implicated in asthma. Orthologous to human ARG2 (arginase 2).

NR:

description
PREDICTED: arginase-2, mitochondrial

GO:

id name namespace
GO:0006525 arginine metabolic process biological_process
GO:0046872 metal ion binding molecular_function
GO:0004053 arginase activity molecular_function

KEGG:

id description
K01476 E3.5.3.1, rocF, arg; arginase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007247521.3 True 2470 mRNA 0.44 8 38648585 38658342

Neighbor

gene id symbol gene type direction distance location
LOC103043501 pqlc3,LOC107706924,LOC107675554,LOC107681540,LOC107757120 coding upstream 203887 38436569 ~ 38444698 (+)
sobp sobp coding upstream 223516 38359610 ~ 38425069 (+)
c25h6orf203 cunh6orf203,LOC103046561 coding upstream 383072 38257503 ~ 38265513 (+)
rdh14 rdh14,rdh14a,LOC107757127,LOC107585474,LOC107675576,LOC107668816,LOC106607934 coding upstream 573470 38072267 ~ 38075115 (+)
LOC111195988 NA coding upstream 779312 37866795 ~ 37869273 (+)
LOC103041043 rdh11,LOC108439707,LOC107585486,LOC107724212,LOC107588583,LOC107705384,LOC105896832 coding downstream 21287 38679629 ~ 38688615 (+)
golga5 golga5 coding downstream 202271 38860613 ~ 38872144 (+)
ndufaf1 ndufaf1 coding downstream 226932 38885274 ~ 38888539 (+)
tmem39b tmem39b,LOC107675583 coding downstream 249224 38907566 ~ 38915971 (+)
ccdc28b ccdc28b,LOC107585497,LOC107675524,LOC107705395 coding downstream 259289 38917631 ~ 38930759 (+)
G222373 NA non-coding upstream 127729 38519936 ~ 38520856 (+)
G222362 NA non-coding upstream 200125 38448202 ~ 38448460 (+)
G222355 NA non-coding upstream 214198 38417113 ~ 38434387 (+)
G222294 NA non-coding upstream 449623 38197603 ~ 38198962 (+)
G222284 NA non-coding upstream 496446 38151599 ~ 38152139 (+)
G222411 NA non-coding downstream 4002 38662344 ~ 38663701 (+)
G222412 vti1b non-coding downstream 9100 38667442 ~ 38675020 (+)
G222413 NA non-coding downstream 17505 38675847 ~ 38678511 (+)
G222415 NA non-coding downstream 32406 38690748 ~ 38691746 (+)
G222426 NA non-coding downstream 73398 38731740 ~ 38731940 (+)
slc38a6 NA other upstream 1629283 37001085 ~ 37019302 (+)
mnat1 mnat1 other upstream 1657101 36976406 ~ 36991484 (+)
G221878 NA other upstream 2239544 36403148 ~ 36409041 (+)
G221737 NA other upstream 2591895 36052516 ~ 36056690 (+)
G221728 fbxo9 other upstream 2676231 35969989 ~ 35972354 (+)
LOC103040744 LOC103040744,LOC108439706,LOC108263332 other downstream 77597 38735939 ~ 38744184 (+)
oip5 NA other downstream 236531 38894873 ~ 38898833 (+)
LOC103047486 LOC108443507 other downstream 539365 39197707 ~ 39271138 (+)
G222694 ppp2r5e,LOC102786035 other downstream 1020160 39678502 ~ 39714015 (+)
zfyve21 zfyve21 other downstream 1672731 40331073 ~ 40339652 (+)

Expression


Co-expression Network